Frateuria edaphi: LQ772_10570
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Entry
LQ772_10570 CDS
T08888
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
fed
Frateuria edaphi
Pathway
fed00260
Glycine, serine and threonine metabolism
fed00630
Glyoxylate and dicarboxylate metabolism
fed00670
One carbon pool by folate
fed00785
Lipoic acid metabolism
fed01100
Metabolic pathways
fed01110
Biosynthesis of secondary metabolites
fed01200
Carbon metabolism
Module
fed_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LQ772_10570 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LQ772_10570 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LQ772_10570 (gcvP)
00670 One carbon pool by folate
LQ772_10570 (gcvP)
Enzymes [BR:
fed01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LQ772_10570 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UGB44433
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All DBs
Position
2245957..2248845
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AA seq
962 aa
AA seq
DB search
MSHNPTPSLRDLENHDAFIARHIGPNDAEIAQMLRTIGYDSLEAMTDAIVPGKIKSPAPL
DLPMAVSEVEALAKIRAIADKNKVFRSFIGQGYYGTHTPNVILRNILENPAWYTAYTPYQ
AEISQGRMEALINFQTMCADLTGMEIANASLLDEGTAAAEAMTLAKRSGKSKSNVFFVSD
RVHPQTLEVLKTRAEAMGIDLHVGPDADATTVDSYGVLLQYPDTFGHVGDYKALADTVHA
RGGIVCVATDLLALTLIAAPGDWGADIVVGNTQRFGVPYGFGGPHAAFMACRDAYKRSMP
GRLIGVSIDAEGKKAYRLTLQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLT
RIARRVHRLAVILTVALRRAGVKVGNDFFDTLHVTGIDAASIHANARAAGINLREVDAGS
LCISLDETTTRADVVALAGLFGAEADIDALDAAVHDALPRTLLRQSAFLTHPVFNTHHSE
HELLRYMRALADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFGQIHPLAPASQTQGY
QELIDGLEAMLVECTGYDAVSLQPNSGAQGEYAGLLAIRAYHRSRGEGHRDICLIPESAH
GTNPASAQMCGMQVVVTKCDANGNVDLEDMRRNAEKYSDRLAALMITYPSTHGVFEEDIV
AICDIVHQHGGQVYTDGANMNALVGVAKPGKWGSDVSHLNLHKTFCIPHGGGGPGVGPCA
VKSHLAPFLPRKLGEDTPVGMVSAASFGSASILPISWMYITLMGSEGLRRATQVALLNAN
YIARRLADHYETLYTGRNGLVAHECILDLRPLKDSTGISAEDVAKRLIDFGFHAPTLSFP
VAGTLMVEPTESESQQELDRFIDAMIQIRDEIRAIEDGRLDREDNPLKHAPHTATQVSAT
EWTHAYPRELAAFPLPSLKFQKYWSPVARVDNIYGDKNVFCSCVPINDFKEEIEAFSEPN
VS
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgagccacaaccccactccctcgctgcgcgacctggaaaaccacgacgccttcatcgcg
cggcatatcggccccaacgatgccgagatcgcgcagatgctgcgcacgatcggctacgac
tcgctcgaggcgatgaccgacgccatcgtcccgggcaagatcaagtcgcccgcgccgctg
gacctgccgatggcggtcagcgaagtcgaggcgctcgccaagatccgcgcgatcgccgac
aagaacaaggtcttcaggagcttcatcggccagggctactacggcacccacacgcccaac
gtcatcctgcgcaacatcctggagaacccggcctggtacacggcctacacgccctaccag
gcggagatctcgcagggccgcatggaagcgctgatcaacttccagacgatgtgcgccgac
ctgaccggcatggagatcgccaacgcctcgctgctggacgaaggcaccgcggcggccgag
gcgatgacgctggccaagcgctcgggcaagtccaagtcgaacgtgttcttcgtctccgac
cgcgtgcacccgcagacgcttgaggtgctcaagacccgcgccgaggcgatgggcatcgac
ctgcacgtaggcccggatgccgacgcaacgaccgtcgacagctacggcgtgctgctgcag
taccccgataccttcggccacgtcggcgactacaaggcgctggccgacaccgttcacgcg
cgcggcggcatcgtctgcgtggcgaccgacctgctggcgctcacgctgatcgcggcgccg
ggcgactggggtgcggacatcgtggtcggcaatacccagcgcttcggcgtgccctacggc
ttcggcggcccgcacgcggcctttatggcctgccgcgacgcctacaagcgctcgatgccg
ggccgcctgatcggcgtctcgatcgacgccgaaggcaagaaggcttaccgcctgacgctg
cagacgcgcgagcagcacatccgccgcgagaaggccacttccaacatctgcaccgcgcag
gtcttgctggcggtgatggcgagcatgtacgccgtctatcacggccccgaaggcctgacc
cgcatcgcccgccgcgtgcatcgcctggcggtgatcctgacggtcgcgctgcgccgggcc
ggagtgaaggtcggcaacgacttcttcgataccctgcacgtcaccggcatcgatgccgca
tccatccatgcgaacgcccgcgccgccggcatcaacctgcgcgaagtggacgccggcagc
ctgtgcatcagcctggacgagaccaccacccgcgccgacgtcgtcgcgctggcgggcctg
ttcggcgccgaggccgacatcgacgcactggacgccgccgtgcacgacgccctgccgcgc
acgctgctgcgccagagcgcgttcctcacccatccggtgttcaacacccaccacagcgag
cacgagctgctgcgctacatgcgcgcgctggccgacaaggaccttgcgatggatcgcacg
atgatcccgctgggctcgtgcaccatgaagctcaacgccaccgcggagatgatcccggtg
acctggcccgaattcggccagatccacccgctggcgccggcttcgcagacccagggctac
caggaactgatcgatggcctcgaggccatgctggtcgaatgcaccggctacgacgcggtc
agcctgcagcccaactccggggcgcagggcgaatacgccggcctgctcgcgatccgcgcc
taccaccgctcgcgcggcgaaggccatcgcgacatctgcctgatccccgagtcggcccac
ggcaccaaccccgcttccgcgcagatgtgcggcatgcaggtggtggtaaccaagtgcgac
gccaacggcaacgtggacctcgaggacatgcgccgcaacgcggagaagtattccgaccgt
ctcgccgcgctgatgatcacctatccgtccacgcacggcgtgttcgaggaggacatcgtc
gccatctgcgacatcgtccaccagcacggcggccaggtgtacaccgacggcgccaacatg
aacgcgctggtcggcgtcgccaagccgggcaagtggggttcggacgtctcgcacctcaac
ctgcacaagaccttctgcatcccgcacggcggcggcggcccgggtgtgggcccgtgcgcg
gtcaagtcgcatctcgccccgttcctgccccggaagctcggcgaggacacgcccgtgggc
atggtctcggccgcgagcttcggcagcgcgagcatcctgccgatcagctggatgtacatc
acgctgatgggcagcgaaggcctgcgccgtgccacccaggtcgcgctgctcaacgccaac
tacatcgccaggcggctggccgatcactacgagacgctctacaccggccgcaacgggctg
gtggcgcacgagtgcatcctcgatttgcgcccattgaaggattccaccggcatcagcgcc
gaggacgtggccaagcggctgatcgacttcggcttccacgcgccgaccctgagcttcccg
gtggcgggcacgctgatggtcgagccgaccgagtccgaatcgcagcaggagctcgaccgc
ttcatcgacgcgatgatccagatccgcgacgagatccgcgcgatcgaggacggccgcctg
gaccgcgaggacaacccgctcaagcacgccccgcacacggccacccaggtgtcggcgacc
gagtggacccacgcctacccgcgcgaactggccgccttcccgctgccgagcctgaagttc
cagaagtactggtcgccggtggcccgcgtggacaacatctacggcgacaagaacgtgttc
tgcagctgcgtgccgatcaacgacttcaaggaagagatcgaggcgttcagcgaaccgaac
gtgtcctga
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