Frateuria edaphi: LQ772_10710
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Entry
LQ772_10710 CDS
T08888
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fed02000
]
LQ772_10710
Transporters [BR:
fed02000
]
Other transporters
Pores ion channels [TC:
1
]
LQ772_10710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
UGB44459
LinkDB
All DBs
Position
complement(2278862..2279998)
Genome browser
AA seq
378 aa
AA seq
DB search
MKRKGLYFLIALALGGVGAVHAQDNTADAAADTAPMTTTGDYDGRWYIAPTIGGYYNDTD
RNTNSRQFYYGLGIGRFIAPNASIDLFIDRTQRDRDAAVGGGNWSNNNFGVTARFYGGDW
NAWRPYVLAGVMGSYHQNAIDDGWSPAAQLGVGVSKTVSDSSDIRIETGYRYDWDDKSQP
TEDGYGDWFLGFSIVSRFGEPAAAPEQAAPPPPPPANDCSTQDSDNDGVNDCEDKCPATA
AGTIVGPDGCPQKVVIDLRGVNFKFDRPSKGETDISKALAEPTSDSLAILDQAVDTLQRY
PQVHVTVAGYTDSVGTDAYNQSLSERRAKIVYDYLTSHGIDASRLEGPIGHGEADPIDSN
DTNDGRARNRRTELQVQQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaagggcttgtatttccttattgccttggccctgggcggcgtaggtgccgtt
cacgcgcaggacaataccgctgacgccgccgccgataccgccccgatgaccaccacgggc
gattatgacggccgttggtatatcgccccgaccattggcggctactacaacgataccgat
cgcaacaccaacagccgccagttctactacgggctcggtatcggccgtttcatcgctccg
aacgcttcgatcgacctgttcatcgaccgcacgcagcgtgaccgcgatgccgccgtgggc
ggtggcaactggtccaacaacaacttcggcgtcactgcgcgtttctacggtggcgactgg
aatgcctggcgtccgtatgttctcgccggcgtgatgggcagctaccaccagaacgcgatc
gacgatggctggtcgcctgccgcccagctgggcgtgggcgtgtccaagactgtctccgac
agctcggacatccgcatcgagaccggttaccgctacgactgggacgacaagagccagccg
acggaagacggttacggcgactggttcctgggcttcagcatcgtgtcgcgcttcggcgag
ccggctgccgctccggaacaggctgccccgccgccgcccccgccggccaatgactgctcc
acccaggacagcgacaacgacggcgtgaacgactgcgaagacaagtgcccggccaccgcc
gccggcacgatcgtcggtccggacggttgcccgcagaaggtcgtgatcgacctgcgcggc
gtcaacttcaagttcgaccgtccgtcgaagggcgaaacggacatcagcaaggcgctcgcc
gagccgacctccgactcgctggccatcctcgaccaggccgtcgataccctgcagcgctac
ccgcaggtgcacgtgactgtcgccggctacaccgactcggtcggtaccgacgcctacaac
cagtcgctgtcggagcgtcgcgcgaagatcgtgtacgactacctgacctcgcacggcatc
gatgccagccgcctggaaggcccgatcggccacggcgaagccgacccgatcgattcgaac
gacaccaacgatggccgcgcgcgcaaccgccgcacggagctgcaggtccagcagtaa
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