Frateuria edaphi: LQ772_11200
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Entry
LQ772_11200 CDS
T08888
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
fed
Frateuria edaphi
Pathway
fed00450
Selenocompound metabolism
fed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LQ772_11200
Enzymes [BR:
fed01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
LQ772_11200
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
LQ772_11200
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Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
SepSecS
Motif
Other DBs
NCBI-ProteinID:
UGB44555
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Position
complement(2396924..2398177)
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AA seq
417 aa
AA seq
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MSATAAHAHPAPALDIERIRSDFPLLARSVHGKPLVYLDNANTSQKPAAVIEAVDAHYRM
HNANVSRAVHQLGEEATLAYEGARDKLARFINAPSRNELVLTSGTTQAINLVAYSYALPQ
LKPGDTILTTLMEHHANIVPWQLVAGRSGASVKFAPIDERGELDVERYLEMLTPEVKLAC
VAHVSNVLGTVNPVREIARECARRGIPLLVDGSQAVPHRPVDVQALGCDFYAFTGHKMLG
PTGTGALWAKRAHLDAMPPFFGGGDMIRQVRVDGTTFADPPHKFEAGTPNIAGFVGLGVA
VDYYGTLDLAAIHAWEQQLLAYATERLREVPGARLFGEAAEKEPVISFLIEGTQSTDLAT
LLDLEGVAVRSGHHCAHPLMQHFGVPATLRASLAFYNTMEEVDVFVAALEKVRKLLM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaccgccgcccacgcacacccggcgcctgccctcgacatcgagcgcatccgc
tccgatttcccgttgctcgcccgcagcgtgcatggcaagccgctggtctacctggacaac
gccaacaccagccagaagcccgcggcggtgatcgaggcggtggacgcgcactaccggatg
cacaacgccaacgtctcgcgggccgtgcaccagctcggcgaagaagcgacgctggcctac
gaaggcgcgcgcgacaagctggcccgcttcatcaacgccccctcgcgcaatgagctggtg
ctgacctccggtaccacccaggcgatcaacctggtggcctacagctacgcattgccgcag
ctcaagcccggcgacacgatcctgaccaccttgatggagcaccacgccaacatcgtgccg
tggcaactggtcgccgggcgcagcggcgcttcggtgaagttcgcgcccatcgacgagcgc
ggcgaactggacgtcgagcggtatctggagatgctcacccccgaggtgaaactcgcctgc
gtggcgcacgtgtccaacgtgctcggcaccgtgaacccggtgcgcgagatcgcccgcgag
tgcgcgcgccgcggcatcccgctgctggtggacggctcgcaggcggtaccgcatcggccg
gtcgacgtgcaggcgctcggctgcgatttctacgccttcaccggacacaagatgctcggc
cccaccggcaccggcgcgctgtgggcgaagcgggcgcacctggacgccatgccgccgttc
ttcggcggcggcgacatgatccggcaggtacgcgtggacggcaccaccttcgccgatccg
ccgcacaagttcgaggcgggcacgcccaacatcgccgggttcgtcggcctgggcgtggca
gtggactactacggcacgctggacctggcggcgatccatgcgtgggagcagcaactgctg
gcctacgccaccgagcgcctgcgcgaggtgccaggggcgcggctgttcggcgaggcagcg
gaaaaggagccggtgatctccttcctcatcgaaggcacgcagtcgaccgacctggcgacg
ctgctggatctggaaggcgtggccgtgcgctcgggccaccactgcgcgcatcccctgatg
cagcacttcggcgtgcccgcgacgttgcgtgcgtcgctggcgttctacaacacgatggaa
gaggtcgacgtgttcgtggccgcgctggagaaggtccgcaagctgctgatgtga
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