Frateuria edaphi: LQ772_11470
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Entry
LQ772_11470 CDS
T08888
Name
(GenBank) rRNA pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fed03009
]
LQ772_11470
Enzymes [BR:
fed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
LQ772_11470
Ribosome biogenesis [BR:
fed03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LQ772_11470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UGB44607
LinkDB
All DBs
Position
2452380..2453102
Genome browser
AA seq
240 aa
AA seq
DB search
MSDPVRLAKYVADLVRCSRTEAEQYIKNGWVTVGGRVVEDPAYPVSTEAVALDPAAQLEA
VEPATILLHKPVGYDAIKGRKAAAGLVQPQTRWPDDPSGVRLLERHFHRLTPLVPLETEA
SGLMVLTQDGRVWRRLTEDRDEIEQEFVVEVGGRIAPYGLHKLNHGLHYRGRPLRPCKVS
WQNEIRLRFALKGVQEGQLRDMCAQVGLDVVAIRRIRIGKVPLAKMPVGMWRYLPVGERF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatccggttcgactggcgaaatacgtcgccgacctggtccggtgctcacgcacc
gaggccgagcagtacatcaagaacggctgggtgaccgtcggcgggcgcgtggtggaggat
ccggcgtacccggtctcgaccgaagccgtcgcgctcgacccggctgcgcaactggaagcc
gtcgagccggccacgatcctcctgcacaagccggtcggctacgacgcgatcaagggccgc
aaggccgcggcggggctggtgcaaccgcaaacacgctggccggacgatccctcgggcgtg
cgcttgctcgagcgtcatttccatcgcctgacgccgctggtgccgctggaaaccgaagcc
agcggcctgatggtgctgacccaggacggccgcgtgtggcgccggctgaccgaagaccgg
gacgagatcgagcaggaattcgtggtcgaggtcggcggccggatcgcgccctatggcctg
cacaagctcaaccacggcttgcactatcgcggccgtccgctgcggccgtgcaaggtcagc
tggcagaacgagatccgcctgcgcttcgcgctcaagggcgtgcaggaggggcaactgcgc
gacatgtgcgcgcaggtcggcctggacgtggtggcgatccggcgcatccgcatcggcaag
gtgccgctggcgaagatgcccgtcggcatgtggcgctacctgcccgtcggcgagcgcttc
tga
DBGET
integrated database retrieval system
