Frateuria edaphi: LQ772_11875
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Entry
LQ772_11875 CDS
T08888
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
fed
Frateuria edaphi
Pathway
fed00280
Valine, leucine and isoleucine degradation
fed00650
Butanoate metabolism
fed00907
Pinene, camphor and geraniol degradation
fed01100
Metabolic pathways
fed01120
Microbial metabolism in diverse environments
fed04146
Peroxisome
Module
fed_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LQ772_11875
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LQ772_11875
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LQ772_11875
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LQ772_11875
Enzymes [BR:
fed01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
LQ772_11875
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
UGB44685
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All DBs
Position
2545402..2546304
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AA seq
300 aa
AA seq
DB search
MTAPVDTVRIVEVGARDGLQNEKTLLPAEVKIALIDRLSSTGLTTIEATSFVSPKWVPQL
ADAAEVFSGIRKVPGVRYPVLVPNLQGYERARAVGAQEIAVFTAASEAFNRKNINASIDE
SIERFMPVIERAKSDGVAVRGYVSTVLGCPYQGEVPVADVVRVAQRLHALGCYEVSLGDT
IGVGTAAKARTMLRAVAQAVPMQALAVHFHDTYGQALANILACLEEGVRVVDSAVSGTGG
CPYAKGATGNVATEDVAYMLEGMGMHTGVDLDLLIATGAWLSAQLHKETASRVTRARTAA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccccgtcgataccgtccggatcgtcgaagtcggcgcccgcgacggcctgcag
aacgaaaagaccctgctgccggccgaggtgaagatcgcgctgatcgaccggctttcgtcc
accggcctgaccaccatcgaggcgaccagcttcgtcagtcccaagtgggtgccgcaactg
gccgacgctgcggaggtcttcagcggcatccgcaaggtgccgggcgtgcgctatcccgtg
ctggtgccgaacctgcaaggctacgagcgcgcgcgggcagtgggcgcgcaggagatcgcg
gtgttcaccgcggccagcgaggcgttcaaccgcaagaacatcaacgcttcgatcgacgag
tcgatcgagcgattcatgccggtgatcgagcgcgccaaatccgacggcgtggccgtacgc
ggctatgtctccaccgtgctcggctgcccctaccagggcgaggtgccggtcgccgacgtc
gtgcgcgtggcgcagcggctgcatgcgctgggctgctatgaggtttcgctgggcgacacc
atcggcgtgggcaccgcggccaaggcgcggacgatgctgcgcgcagtggcacaagcggta
ccgatgcaggcgctggccgtgcatttccacgacacctacgggcaggcattggcgaacatc
ctggcctgcctggaggaaggcgtgcgcgtggtcgacagcgcggtctccggtaccggcggc
tgtccatacgccaagggcgccaccggcaacgtcgcgaccgaggacgtggcctacatgctg
gagggcatgggcatgcataccggggtcgatctggacctgctcatcgccaccggggcctgg
ctctcggcgcaactgcacaaggaaacggccagccgtgtcacccgtgcgcgcacggccgcc
tga
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