Frateuria edaphi: LQ772_12930
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Entry
LQ772_12930 CDS
T08888
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
LQ772_12930
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Ortholog
Paralog
GFIT
Motif
Pfam:
YknX_C
BSH_CzcB
BSH_RND
RND-MFP_C
CzcB_C
Biotin_lipoyl
BSH_YknX
BSH_CusB
HH_EMRA
DUF8001
Beta-barrel_RND_2
TP096X_C
Motif
Other DBs
NCBI-ProteinID:
UGB44888
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Position
complement(2768634..2769905)
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AA seq
423 aa
AA seq
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MIRDTSAQDRLVEVKPNRKRQLLIGGIGLAVLVALALALPTAMRLFSADASVSASRLSFA
TVERGLFVRDIAAEGKVVAAVSPTLYATSGGAVTLKVHAGDTVKKDQVLAVVDSPELTNK
LLQEESNADAMEVEYQRAQIEARKQRSSLQKAYDNALIDQQAAERDLARNEKAFKLGAVS
GMDVDRAKDTLQKARLTTQHAKADLGMDNDSLNFDIKSKKLAHERQELLVKDLERQVDDL
NVKSPVDGQVGQLFIAERATVAKDAKLLSVIDLSALEVEMQVPESFARDLGIGMSGEITG
NGHTWKGLVSAISPEVVNGEVAARLRFEGATPKQLRQNQRLSVRILLDKRDNVLTVQRGS
FVDESGGNFAYVVHEGIAEKKPIRVGASSIDKVEILDGLKEGDRIVISGTDNFKDAAKVA
ISD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcgacacctccgctcaagaccgcctggtcgaggtcaaacccaaccgcaagcgc
cagctgctcatcggcggcatcggcctggccgtgctggtcgcgctggcccttgcgctgccg
accgcgatgcggttgttctcggccgacgcgtcggtcagcgcctcgcggctttccttcgcc
accgtcgaacgcggcctgttcgtgcgcgacatcgcggccgagggcaaggtggtggcggcg
gtcagccccacgctctatgccacttccggcggcgcggtcacgctcaaggtgcacgcgggc
gacacggtgaagaaggaccaggtgctggccgtggtcgacagccccgaactgaccaacaag
ctgctgcaggaagagtccaacgccgatgcgatggaagtggaataccagcgcgcgcagatc
gaggcgcgcaagcagcgctcctcgctgcagaaggcctacgacaacgcgctgatcgaccag
caggcggccgagcgcgacctggcccgcaacgagaaggcgttcaagctcggcgcggtttcc
ggcatggacgtggaccgcgccaaggacacgctgcagaaggccaggctgaccacccagcac
gcgaaggcggacctggggatggacaacgacagcctgaacttcgacatcaagtccaagaag
ctcgcgcacgagcgccaggagctgttggtcaaggacctcgagcgccaggtcgacgacctc
aacgtcaagtcgccggtggacggccaggtcggccagctgttcatcgccgagcgcgcgacc
gtggccaaggacgccaagctgctcagcgtgatcgacctctccgcgctggaagtggagatg
caggtacccgaaagcttcgcgcgtgacctggggatcggcatgtccggcgagatcaccggc
aacgggcacacctggaagggcctggtcagtgcgatctcgcccgaagtggtcaacggcgag
gttgccgcccgcctgcgcttcgagggcgccacgcccaagcagctgcgccagaaccagcgc
ctgtcggtgcgcatcctgctcgacaagcgcgacaacgtgcttaccgtgcagcgcggttcc
ttcgtcgacgagtccggcggcaacttcgcctacgtcgtgcacgagggcatcgccgagaag
aagccgatccgcgtgggcgccagcagcatcgacaaggtcgagatcctggacggcctgaag
gaaggcgaccggatcgtgatctccggcaccgacaacttcaaggatgcggccaaggtcgcc
atcagcgattga
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