KEGG   Frateuria edaphi: LQ772_12990
Entry
LQ772_12990       CDS       T08888                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
fed  Frateuria edaphi
Pathway
fed00740  Riboflavin metabolism
fed01100  Metabolic pathways
fed01110  Biosynthesis of secondary metabolites
fed01240  Biosynthesis of cofactors
fed02024  Quorum sensing
Module
fed_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:fed00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    LQ772_12990 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LQ772_12990 (ribD)
Enzymes [BR:fed01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     LQ772_12990 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     LQ772_12990 (ribD)
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: UGB47487
LinkDB
Position
complement(2780058..2781161)
AA seq 367 aa
MTEAFSSIDHLHLAHALRLAARGLYTTQPNPRVGCVIAHGEQVVGTGWHQRAGEPHAEVF
ALREAKDAARGATAYVTLEPCAHFGRTPPCADALVAAGVARVVIAAEDPFPQVAGNGIAK
LRAAGIAVESGLLRGQARELNIGFFSRIERGRPWVRVKLAMSLDGRTALAHGESKWITGE
AARADVQRWRARSSAILSGSGTVLADNPRLTVRQVEAEAGAPAPPLRVVLDTHLRTPAGS
HVLDAAAPTVLVHAADAPVAPHLASVGRLAITSDAGRLDLAAVLAALAGREINEVHVEAG
PALCGALFAQGLADELLLYVAPVLLGDQARPLLELPPLAAMADRWQLQVLDQRMVGQDLR
LRLRVRD
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgaccgaagcgttctccagcatcgaccacctgcacctggcgcacgcactgcgacttgcc
gcccgtggcctctacacgacccagccaaacccgcgcgtaggttgcgtgatcgcgcacggc
gaacaggtggtcggcaccggctggcaccagcgcgccggcgagccgcacgccgaggtgttc
gcgctgcgcgaagcgaaggatgcggcgcgtggcgccaccgcgtacgtgacactcgagcct
tgcgcgcatttcggccgcacgccgccgtgtgccgatgcgctggtggccgccggcgtggcg
cgggtggtgatcgccgcggaagatccattcccgcaggtggccggcaacggaatcgcgaag
ctgcgtgcggcgggcatcgccgtcgaaagcggcctgctgcgcgggcaggctcgcgaactc
aacatcggtttcttcagccgcatcgaacgcggccgcccgtgggtgcgcgtgaagctggcg
atgagcctggacggccgcacggccctggcccacggcgagtcgaagtggatcaccggcgaa
gccgcccgcgccgatgtgcagcgctggcgcgcgcgaagctccgccatcctatccggcagc
ggcacggtgctggccgacaacccacgccttaccgtgcgccaggtggaagcggaggccggg
gcgccggcgccacccttgcgcgtggttctcgatacgcacctgcgcacgccggcgggcagc
cacgtcctcgatgcggcggcgcccaccgtgctggtgcatgcggcggatgcgcccgtcgcg
ccccatctcgcaagcgtcgggcggctggccatcaccagcgacgccggccgcctcgacctg
gcggccgtgctcgccgccctggcgggacgcgaaatcaacgaggtccacgtcgaagccggt
cctgcgctgtgcggtgcgctgttcgcgcaagggctcgccgacgaactgctgctctacgtc
gcgccggtgctgctgggcgaccaggcccggccgctgcttgaactgcccccgctggccgcc
atggccgaccgctggcagctgcaggtgctcgaccagcgcatggtggggcaggacttgcgc
ctgcgcctgcgcgtgagggactga

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