Frateuria edaphi: LQ772_13090
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Entry
LQ772_13090 CDS
T08888
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
fed
Frateuria edaphi
Pathway
fed00020
Citrate cycle (TCA cycle)
fed00640
Propanoate metabolism
fed00720
Other carbon fixation pathways
fed01100
Metabolic pathways
fed01110
Biosynthesis of secondary metabolites
fed01120
Microbial metabolism in diverse environments
fed01200
Carbon metabolism
Module
fed_M00009
Citrate cycle (TCA cycle, Krebs cycle)
fed_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LQ772_13090 (sucD)
00640 Propanoate metabolism
LQ772_13090 (sucD)
00660 C5-Branched dibasic acid metabolism
LQ772_13090 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
LQ772_13090 (sucD)
Enzymes [BR:
fed01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
LQ772_13090 (sucD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
GFO_IDH_MocA
CoA_binding_2
KARI_N
Motif
Other DBs
NCBI-ProteinID:
UGB44919
LinkDB
All DBs
Position
complement(2802823..2803695)
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AA seq
290 aa
AA seq
DB search
MSVLVNKNTKVLVQGFTGQQGTFHAEQAIDYGTKIVGGVTPGKGGSEHIGLPVFNSMEEA
VADTGADASVIFVPPPFAADSILEAIDAGIRVIVAITEGIPVLDMLRVKNVLAQHPETVL
IGPNCPGIITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVFQTTNEGLGQSTCIGIG
GDPINGLNFIDCLKLFQDDPQTEGIIMVGEIGGSAEEDAAEFIGEYVTKPVVSFIAGASA
PPGKRMGHAGAIISGGKGTAAAKFAALEKAGVTTVKSPADLGKTLAKLMK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttctggtcaacaagaatacgaaggtgctggtgcagggcttcaccggccagcag
ggcaccttccacgccgaacaggcgatcgactacggcaccaagatcgtaggcggtgtcacc
cccggcaagggcggctccgagcatatcggcctgccggtcttcaattcgatggaagaagcc
gtcgccgataccggtgccgacgcctcggtcatcttcgtgccgccgccgttcgcggccgat
tcgatcctggaagcgatcgacgcgggcatccgcgtgatcgtggcgatcaccgagggcatc
ccggtgctggacatgctgcgcgtgaagaacgtgctggcgcagcatccggagaccgtgctg
atcgggccgaactgccccggcatcatcaccccgggcgagtgcaagatcggcatcatgccg
ggccacatccacaagccgggcaaggtcggtatcgtgtcgcgctccggcacgctgacctat
gaggccgtgttccagaccaccaacgagggcctgggccagtccacctgcatcggcatcggc
ggcgacccgatcaacggcctgaacttcatcgactgcctgaagctgttccaggacgatccg
cagaccgaaggcatcatcatggtcggcgagatcggcggcagcgccgaggaagacgccgcc
gagttcatcggcgagtacgtgaccaagccggtggtgtccttcatcgcaggtgcgtcggct
cctccgggcaagcgcatgggccatgccggcgcgatcatctccggcggcaaggggaccgcg
gcggcgaagtttgcggcgctggagaaggcgggcgtgacgacggtgaagtcgccggccgac
ctcggcaagacgctggcgaagctgatgaagtaa
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