Frateuria edaphi: LQ772_14345
Help
Entry
LQ772_14345 CDS
T08888
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
fed
Frateuria edaphi
Pathway
fed00550
Peptidoglycan biosynthesis
fed01100
Metabolic pathways
fed01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQ772_14345 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LQ772_14345 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fed01011
]
LQ772_14345 (mrdA)
Enzymes [BR:
fed01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LQ772_14345 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
fed01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LQ772_14345 (mrdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
UGB45154
LinkDB
All DBs
Position
complement(3072799..3074745)
Genome browser
AA seq
648 aa
AA seq
DB search
MKRRRALKDPRGEAALFQRRSLVGFALIVLGLIALSGRFFYLQVMRHDEFVTRSENNRVK
PKVIPPARGLIYDRNGVLLADNVPAFRLEVVPEQVPDMSAMLAQIGAVVPLDPDDVADFR
KRLKQSRRFENVPLKMHLSEDDIARFAINRWRFPGVDVVPYLTRHYPYGELFAHVIGYVG
RIDADDLKRLDPDRYQGTSHVGRSGIERSYEDVLHGTPGYELVEVNADGRTQRVLETHAP
VPGKNLYLSIDVRIQKATMAAFDGRAGSAVAIDPRNGQVLAMVSVPSFDPNLFVNGISSA
DYKALTTAPDKPLYNRALRGVYPPGSTVKPFLALGGLAYGVRRPEDTVLSTGEFCLPGAS
RCYRDDKRGGDGVVDMVKAIEKSTNTYFYKLALDLGIDRLSDWMGRFGFGRKTGIDLDGE
ENGVLPSRDWKMAHSRQPWYPGETIIAGIGQGYWAVTPLQLAHAVSILAGKGIPRAPRLV
MATQDGVDAPRQPLPNPPTGPSLVTDPAHLDVIKQGMEAVVTSGTGAKQFIGFPLVVAGK
SGTAERFSRTSSAYDTNKNTAYLAARHRAWFEAFAPADDPKISVVAMLEAGAWGAEAAGP
IVRTVMESWLATQGGAPVKSQPPAAAPAPLAPDQPEDMPVPAEGGTTP
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcggcgcgcactgaaggatccccgcggcgaggcggcgcttttccagcggcgc
tcgctggtcggattcgccctgatcgtgctgggcctgatcgccttgtccgggcgcttcttc
tacctgcaggtgatgcgccacgacgagttcgtgacccgctcggagaacaaccgcgtcaag
ccgaaggtgatcccgccggcccgtgggctgatctacgaccgcaacggcgtgctgctggcc
gacaacgtgccggcattccggctcgaggtggtgcccgagcaggtgccggacatgagtgcc
atgctcgcgcagatcggcgcggtggtgccgctggacccggacgacgtcgccgacttcagg
aagcgcctgaaacagagccgtcgcttcgagaacgtccccttgaagatgcacctgtccgag
gacgacatcgcccgcttcgcgatcaaccgctggcgcttcccgggcgtggacgtggtgccc
tacctgacccgccactatccctacggcgagttgttcgcgcacgtgatcggctacgtcggc
cgcatcgatgcagacgacctcaagcgcctggacccggaccgctaccagggcaccagccac
gtcggtcgcagcgggatcgagcgctcgtacgaagatgtgctgcacggaacgccgggctat
gaactggtcgaggtcaacgccgacggccgcacccagcgcgtgctcgaaacccatgcgccg
gtccccggcaagaacctctatctctcgatcgacgtgcgcatccagaaggcgaccatggcc
gcgttcgacggtcgagcgggctccgccgtggcgatcgatccgcgcaacggccaggtcctg
gccatggtcagcgtgccgagcttcgatccgaacctgttcgtcaacggcatcagcagtgcc
gactacaaggcattgaccaccgcgccggacaagccgctgtacaaccgcgcgctgcgcggc
gtgtatccgcccggctccacggtgaagccgttcctggccctcggcggcctggcctacggc
gtccgcaggccggaggatacggtgctgtccacgggcgagttctgcctgcccggggcctcg
cgctgctaccgcgacgacaagcgcggtggcgatggcgtggtcgacatggtcaaggcgatc
gagaaatcgaccaacacctacttttacaaacttgcgctggacctgggcatcgaccgcctg
agcgactggatggggcgcttcggcttcggccgaaagaccggcatcgacctcgacggcgag
gagaacggcgtcttgccttcgcgcgattggaaaatggcgcattcgcgccagccctggtat
ccgggagaaacgatcatcgccggcatcggccagggctactgggcggtgacgccattgcag
ctggcgcatgcggtgtcgatcctggccgggaagggcatcccgcgtgcgcccaggctggtg
atggcgacccaggatggtgtcgatgcccccagacagccgttgcccaacccgccgaccggc
ccctcgctggtgaccgatccggcccacctggacgtgatcaagcaaggcatggaagcggtg
gtgaccagcggcaccggcgccaagcagttcatcggctttccgctggtggtcgcgggcaag
agcggcacggccgagcgcttctcgcgcacgtcctcggcctacgacaccaacaagaacacc
gcctaccttgccgcgcgccatcgcgcctggttcgaggccttcgcgccggcggacgacccg
aagatctcggtggtcgccatgctcgaggccggcgcgtggggtgccgaagcagcgggcccg
atcgtgcgtacggtgatggagtcctggcttgccacgcagggtggggcaccggtcaaatct
cagccgccggcggccgccccggcacccctggcgcccgaccagcccgaagacatgccggtg
ccggccgagggcgggaccacgccatga
DBGET
integrated database retrieval system
