Frateuria edaphi: LQ772_14635
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Entry
LQ772_14635 CDS
T08888
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fed
Frateuria edaphi
Pathway
fed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LQ772_14635 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fed03019
]
LQ772_14635 (groL)
03110 Chaperones and folding catalysts [BR:
fed03110
]
LQ772_14635 (groL)
03029 Mitochondrial biogenesis [BR:
fed03029
]
LQ772_14635 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fed04147
]
LQ772_14635 (groL)
Enzymes [BR:
fed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LQ772_14635 (groL)
Messenger RNA biogenesis [BR:
fed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LQ772_14635 (groL)
Chaperones and folding catalysts [BR:
fed03110
]
Heat shock proteins
HSP60 / Chaperonin
LQ772_14635 (groL)
Mitochondrial biogenesis [BR:
fed03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LQ772_14635 (groL)
Exosome [BR:
fed04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LQ772_14635 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LQ772_14635 (groL)
Exosomal proteins of breast cancer cells
LQ772_14635 (groL)
Exosomal proteins of colorectal cancer cells
LQ772_14635 (groL)
Exosomal proteins of bladder cancer cells
LQ772_14635 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UGB45201
LinkDB
All DBs
Position
complement(3136810..3138459)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEVRFGEDARSRILKGVNTLANAVKVTLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKYENLGAQIVKEAASKTSDVAGDGTTTATVLAQAFIQEGLKAVAAGMNPMDLKRGI
DKAVIAAVGELKKLSNPTADDKAIAQVGTISANSDSNIGDIIATAMKKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFINNQASQQVELDDPYILIHDKKVSNVRELLPVLEAV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVAAVKAPGFGDRRKAILEDIAILTNGQV
ISEEVGLQLEKATINDLGRAKRVVITKENTTIIDGAGEAERIQSRIGQIKAQIEETSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALKAVEGLKGDNEDQNLGIAITRRALEAPLRAIVANAGEEPSVILNKVKDGSGNFGYNA
ATGEFGDMVQMGILDPTKVTRTALQHASSVAGLAITTEAIVAELPKKDEGHGGAGGMGGG
MGGMGGMDF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtccgcttcggcgaagacgcccgctcgcgcatcctcaagggcgtg
aacaccctggccaacgcggtcaaggtcaccctgggtcccaagggccgcaacgtcgtgctc
gagaagagcttcggcgccccgacgatcaccaaggacggcgtgtccgtcgccaaggagatc
gagctggccgacaagtacgagaacctcggcgcgcagatcgtcaaggaagccgcttccaag
acctccgacgtcgccggtgacggcaccaccaccgccaccgtgctggcgcaggcgttcatc
caggaaggcctcaaggcggtcgccgccggcatgaacccgatggatctgaagcgcggcatc
gacaaggccgtcattgcggccgtgggcgagctgaagaagctctccaacccgaccgccgac
gacaaggcgatcgcgcaggtcggcaccatctcggccaactccgattccaacatcggcgac
atcatcgccactgcgatgaagaaggtcggcaaggaaggcgtgatcacggtcgaggaaggc
tcgggcctggagaacgagctggacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaaccaggccagccagcaggtcgagctggacgacccgtacatc
ctgatccacgacaagaaggtgtcgaacgtccgcgagctgctgcccgtgctggaggccgtc
gccaaggccggcaagccgctgctgatcgtcgccgaggaagtcgagggcgaggcgctggcc
acgctggtggtcaacacgatccgcggcatcgtcaaggtcgccgccgtcaaggcgccgggc
ttcggtgaccgccgcaaggccatcctcgaggacatcgcgatcctgaccaacggccaggtg
atctccgaggaagtgggcctgcagctggaaaaggccacgatcaacgatctgggccgcgcc
aagcgcgtggtgatcaccaaggaaaacaccacgatcatcgacggcgccggcgaagccgag
cgcatccagtcgcgcatcggccagatcaaggcgcagatcgaggagacctcctccgattac
gaccgcgagaagctgcaggagcgcgtggccaagctggccggcggcgtggccgtcatcaag
gtcggtgccgccaccgaagtcgagatgaaggagaagaaggcccgcgtcgaagacgccctg
cacgcgacccgtgcggccgtcgaggaaggcgtggtgccgggcggcggcgtcgccctgatc
cgtgcgctcaaggccgtcgaaggcctcaagggtgacaacgaggaccagaacctcggcatc
gcgatcacccgccgcgcgctggaagcgccgctgcgcgcgatcgtcgccaacgccggcgaa
gagccctccgtgatcctcaacaaggtcaaggacggctcgggcaacttcggctacaacgcg
gccaccggcgagttcggcgacatggtgcagatgggcatcctggacccgaccaaggtgacc
cgcaccgcgctgcagcacgcttcgtcggtcgcgggcctggcgatcaccaccgaggcgatc
gtggccgaactgccgaagaaggacgaaggccacggcggcgccggtggcatgggcggcggc
atgggtggcatgggcggcatggacttctaa
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