Frateuria edaphi: LQ772_14720
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Entry
LQ772_14720 CDS
T08888
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fed
Frateuria edaphi
Pathway
fed03030
DNA replication
fed03410
Base excision repair
fed03420
Nucleotide excision repair
fed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LQ772_14720 (polA)
03410 Base excision repair
LQ772_14720 (polA)
03420 Nucleotide excision repair
LQ772_14720 (polA)
03440 Homologous recombination
LQ772_14720 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fed03032
]
LQ772_14720 (polA)
03400 DNA repair and recombination proteins [BR:
fed03400
]
LQ772_14720 (polA)
Enzymes [BR:
fed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQ772_14720 (polA)
DNA replication proteins [BR:
fed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LQ772_14720 (polA)
DNA repair and recombination proteins [BR:
fed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LQ772_14720 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LQ772_14720 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UGB45218
LinkDB
All DBs
Position
3152236..3154962
Genome browser
AA seq
908 aa
AA seq
DB search
MAQLILIDGSSYLYRAFHALPPLTNARGEATGALFGVVNMLRATLKAQPEYLAFVCDAPG
RTFRDEIYAEYKANRAAMPDDLRAQVEPMMAIVGALGFPILCVPGVEADDVIGTLALAAA
AQGIDVTISTGDKDLAQLVGPHVKLVNTMTSTTLDIAGVTDKFGVPPERIVDFLSLTGDS
IDNVPGVTKCGPKTAAKWLAEYGSLDGVIANADKIGGKIGEYLREALPKLPLSRELVTIR
TDLELEHGPTDLTLRDRETATLRELFTRYEFKAALRELDAETLGEPGPAPAPQAAPAPAT
PPPAAAKPGDYELVTSPERFEHWLHKLREAPLIAFDTETSDIDAMRAELIGLSFAVESGK
ACYIPVAHDYPGAPWQLDRDQVLHAVKPLFEDPARPKLGQHAKYDINVLSHYGIGVQGLK
HDSMLASYIWNATATRHDMDSLASRYLHYQTIKYEDVAGKGAKQIPFSQVDLDTACRYAA
EDADITLRLHEALQPMLDTVPALKRVYEEIEVPLAPILAGMERKGVLIDVDELRKQSQEL
GKRMHELQQQAYAEAGCAFSLDSPKQLQAILFDQLGLRAKLKTPKGQPSTNEEALEAIAD
DHALPRLILDYRGLAKLRSTYTDKLAQMVNPRTGRVHTCYHQAAVATGRISSSDPNLQNI
PVRTDEGRRIRAAFIAPPGWLVMAADYSQIELRIMAHLSGDEALLRAFKSGGDVHRATAA
EVFGVAPEDITLNQRRAAKAINFGLMYGMSAFGLARQLGIDRGEASDYMARYFSRFAGVR
AFMDATREQAHRDGYVETIFGRRLYLENLKARNQALRSGAERAAVNAPMQGSAADIIKRA
MIAMGSYLCDRTDAHMLMQVHDELVFEVQEDAVDTMRQAVIEHMSGAAELAVPLVVDVGV
GANWEQAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctcatcctgatcgacggctcctcctacctctaccgcgccttccatgcgctg
ccgccgctgaccaacgcgcgcggcgaagcgaccggcgcactgttcggcgtggtcaacatg
ctgcgcgcgacgctgaaagcgcagccggagtacctggccttcgtctgcgacgcgcccggg
cgcacgttccgcgacgagatctatgccgaatacaaggccaaccgcgcggcgatgccggac
gacctgcgcgcgcaggtcgaaccgatgatggcgatcgttggcgcgctgggtttcccgatc
ctgtgcgtccccggcgtggaggccgacgacgtgatcggcacgctggcgctggcggccgcg
gcgcagggcatcgacgtgacgatctccaccggcgacaaggacctggcccagctggtcggc
ccgcacgtgaagctggtcaacacgatgaccagcaccacgctggatatcgccggcgtcacc
gacaagttcggcgtgccgccggagcgcatcgtcgatttcctcagcctcaccggcgacagc
atcgacaacgtgcccggcgtgaccaagtgcggcccgaagaccgcggccaagtggctggcc
gagtacggctcgctggacggcgtgatcgccaacgccgacaagatcgggggcaagatcggc
gagtacctgcgcgaagcgctgcccaagctgccgctgtcgcgtgagctggtcaccatccgc
accgatctcgaactcgagcacggcccgaccgacctcaccctgcgcgatcgcgaaacggcc
acgttgcgcgagctgttcacccgctacgaattcaaggccgcactcagggaactggatgcc
gaaacgctcggcgaaccgggtcccgcgcccgccccgcaggccgctcccgcgccggccacg
ccgccgccggctgccgcgaaacccggcgactacgagctggtcacctcgcccgaacgcttc
gagcactggctgcacaagctgcgcgaggcgccgctgatcgccttcgacaccgaaaccagc
gacatcgacgccatgcgtgccgagctgatcggcctgtccttcgcggtggagtccggcaag
gcctgctacatcccggtcgcgcacgactatcccggcgcgccctggcaactggatcgcgac
caggtgctgcatgcggtcaagccgctgttcgaggatccggcgcggccgaagctcggccag
cacgcgaagtacgacatcaacgtgctgtcgcactacggcatcggcgtgcaggggctgaag
cacgattcgatgctggcctcctacatctggaacgccaccgccacgcgccacgacatggac
tcgctggccagccgctacctccactaccagacgatcaaatacgaggacgtcgccggcaag
ggcgccaagcagatcccgttttcgcaggtcgacctggacactgcctgccgctacgccgcc
gaggacgccgacatcaccctgcggctgcacgaggcgctgcagccgatgctcgataccgtg
ccggcgcttaagcgtgtctacgaggaaatcgaggtgccgctggcgccgatcctcgccggc
atggaacgcaagggcgtgctgatcgacgtcgacgaactgcgcaagcagagccaggaactg
ggcaagcgcatgcacgagctgcagcagcaggcctacgcggaggccggctgcgcgttcagc
ctggactcgcccaagcagctgcaggcgatcctgttcgaccagctcggcctgcgcgcgaag
ctcaagacccccaagggccagccctcgaccaacgaggaggcactggaggcgatcgccgac
gaccatgcgctgccgcggctgatcctcgattaccgcggcctggccaagctgcgttcgacc
tataccgacaagctggcgcagatggtcaacccacgcaccggccgcgtgcacacctgctac
caccaggccgcggtggcgaccgggcgcatttcctcttccgatccgaacctgcagaacatc
ccggtgcgtaccgacgagggccggcgcatccgtgccgccttcatcgcgccgccgggctgg
ctggtgatggcggccgactactcccagatcgagctgcgcatcatggcgcacctgtccggc
gacgaagcgttgctgcgcgccttcaagagcggcggcgacgtgcaccgcgccaccgccgcc
gaagtgttcggtgtcgcaccggaggacatcacgctcaaccagcgtcgcgcggccaaggcg
atcaacttcggcctgatgtacggcatgagcgcgttcggcctggcgcggcagctgggcatc
gaccgcggcgaggcgagcgactacatggcgcgctacttctcgcgcttcgccggcgtgcgc
gccttcatggacgccacccgcgagcaggcccatcgcgacggctacgtggaaaccatcttc
gggcggcggctgtacctggaaaacctcaaggcccgcaaccaggcgctgcgttccggcgcc
gagcgggccgccgtgaacgcgccgatgcaggggagcgcggcggacatcatcaagcgcgcg
atgatcgccatgggttcctatctctgcgaccgcaccgatgcgcacatgctgatgcaggtg
cacgacgaactggtgttcgaggtgcaggaagacgccgtggacacgatgcgccaggccgtg
atcgagcacatgtcgggcgccgccgagctggccgtgccgctggtggtggacgtgggcgtc
ggggcgaactgggagcaggcgcactag
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