Frateuria edaphi: LQ772_15020
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Entry
LQ772_15020 CDS
T08888
Name
(GenBank) TCR/Tet family MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fed02000
]
LQ772_15020
01504 Antimicrobial resistance genes [BR:
fed01504
]
LQ772_15020
Transporters [BR:
fed02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LQ772_15020
Antimicrobial resistance genes [BR:
fed01504
]
Gene variants
Tetracycline resistance genes
Transporters
LQ772_15020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_1_like
Sugar_tr
TRI12
Motif
Other DBs
NCBI-ProteinID:
UGB45275
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All DBs
Position
3216418..3217734
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AA seq
438 aa
AA seq
DB search
MDSNHTALSDTRRRAAVAFIFVTVLLDMLAFGIVIPVLPHLIEQLAGGGIARAAWWVGVF
STVFAVVQFAFSPVQGALSDRFGRRPVILISNLGLAIDFVVLALAPTLWLLFVSRALLGM
TAASFTTANAYIADITPKEKRAAAYGVLGGAFGLGFIVGPGLGGFLGDISLRLPFWVAGG
LALCNFLYGFFILPESLPKERRTPRFEFHSAHPLGSLKLLRRHPQVLGLGVVMFLVYLAH
YVLQTTFVLYADYRYGWGPQAVGFVLMLVGACDGSVQAFLTGRLTPRFGERRVLLAGMAC
GIGAFLLMGVAQQGWLFLAGIPLMALWSLSGPPIQAIMTHQVDPSEQGRLQGAITSLGSF
AGIFGPYLFAQVFAFSIAPTSPLHLPGLAFVLSALLLVAGAIIAARVTAHTAPLARPADA
HSPDAAGAPGALPHDPTH
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaaccacaccgcactcagcgacacgcgccgccgcgcggcggtggccttcatc
ttcgtcaccgtgctgctggacatgctggcgttcggcatcgtcatcccggtgctgccgcac
ctgatcgagcagctggccggcggtggcatcgccagggccgcctggtgggtgggcgtgttc
tccaccgttttcgcggtggtgcagttcgccttctcgccggtgcagggcgcgttgtccgac
cggttcgggcggcggccggtgatcctgatctccaacctcggtctggcgatcgacttcgtg
gtgctggcgctggcaccgacgctgtggctgctgttcgtcagtcgcgcgctgctgggcatg
acggcggcgagcttcacgaccgccaatgcctacatcgccgacatcacgcccaaggaaaag
cgcgcggccgcctacggcgtgctgggtggcgcgttcgggctcggattcatcgtggggccg
gggctgggcggcttcctcggcgacatttcgctgcgactgccgttctgggtcgccggcgga
ctggcgctgtgcaatttcctgtatggcttcttcatcctgcccgagtcgctgccgaaggaa
cggcgcacgccgcgcttcgagttccacagcgcgcatccgctgggctcgctcaagctgctg
cgtcgccatccgcaggtcctcgggctgggcgtggtcatgttcctggtctacctcgcgcac
tacgtgctgcagaccaccttcgtcctgtacgcggactaccgctacggctggggcccgcag
gcggtggggttcgtactgatgctggtcggcgcctgcgacggttcggtgcaggcgttcctg
accggcaggctgaccccgcgcttcggcgagcggcgggtgctgctggcgggcatggcctgc
ggcatcggcgcattcctgctgatgggtgtggcgcaacagggttggctgttcctcgccggc
atcccgctgatggcgctgtggagcctgtccgggccgccgatccaggcgatcatgacgcac
caggtcgatccgtccgaacaagggcggctgcagggcgcgatcaccagcctgggcagcttc
gccggcatcttcgggccgtatctgttcgcgcaggtattcgccttctcgatcgcacccacc
tcgccgctgcacctgcccggcctggcgttcgtgctgtcggcgctgctgctggtcgccggc
gcgatcatcgccgcgcgcgtgaccgcgcataccgcgccgctggcgcgtcccgccgatgcc
cattcccctgacgcggcaggcgccccgggcgcactgccgcacgatcccacccactga
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