Frateuria edaphi: LQ772_15095
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Entry
LQ772_15095 CDS
T08888
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fed02000
]
LQ772_15095
Transporters [BR:
fed02000
]
Other transporters
Pores ion channels [TC:
1
]
LQ772_15095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UGB45290
LinkDB
All DBs
Position
complement(3235198..3237303)
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AA seq
701 aa
AA seq
DB search
MGKRGKWIALAAASCPWALVAQTVTELPPVPVQAMRLDIPPFDLPAALSRAPVAISASGK
PGVNLSEALVGVPGVLARDRQNYAQDEQLSIRGFGARATFGVRGVRLYVDGIPATMPDGQ
GQLSHVALAAADRVEVLRGPFSALYGNSSGGVVQVWSAGGGPVPVRALEAWTGADASLRV
DAQARGVTGPLDYNVALGHFRTDGYRAHSRAQRTSGNARLGFDLGAGRTLTLVLNTLAQP
QAQDPLGLTRAQWHADPRQAVDAAFAFDTRKRVQQQQLGAIWNVEGARDDVRLMGYAGRR
AVTQVLSIPPFAQQSPLSAGGVVDLDGGYGGADARWTHRGQALGRPLEWVLGTSWDVQDQ
HRRGYENFIGDTLGVVGALRRDEHDRVHDFDQYGQLYWHVAEHWSLLLGARHSEVAFHVR
DRYVTAANPDDSGQVRYRAITPVAGVVYRPGAQVRLYASYGEGFETPTFNELGYRRDGGA
GLALDLSPARSRNEELGLKWQPHDGVGVELALFRADSRDELAVASNHDGRSTYRNVGRSR
RQGAELAVDGDLGAGWRLQLGMTWLDARFRSGFLACSGTPCIVPDLPVPPGTRIPGVPRR
YGSLRLERGGELGWRGGIELDGAGAVPVDDRNSAMAPGFLRTGLDLGYGMALGRTRLHVS
ARVDNLFDRRIVGSVIVNEGNGRYYEPAPGRSMSLGLRLEL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacgtgggaagtggatcgcgctcgcagcagccagttgcccatgggcattggtg
gcgcagaccgtgaccgaactgccgccggtcccggtgcaggcgatgcggctggacatcccg
ccgttcgatctgcccgccgccttgtcccgcgcgccagtggccatcagcgccagcggcaag
ccgggtgtaaatctctccgaagcgctggtcggggtgcccggcgtgctggcgcgcgaccgg
cagaactacgcgcaggacgaacaactctccatccgcggcttcggggcgcgcgccaccttc
ggcgtgcgcggcgtgcggctgtacgtcgacggcattcccgccacgatgccggacgggcag
ggccagctctcgcacgtcgcgctggccgcggccgatcgcgtggaggtgctgcgcgggccg
ttctcggcgctgtatggcaactcctccggcggcgtggtgcaggtatggagcgccgggggc
gggccggtgccggtgcgcgcgctggaagcctggaccggtgccgacgccagcctgcgcgtg
gacgcccaggcgcgcggcgttaccggcccgctcgactacaacgtggcgctgggccacttc
cgtaccgacggctaccgcgcgcacagccgcgcgcaacgcacctccggcaacgcgcggctg
gggttcgacctgggcgccggtcgcacgttgaccctggtgctcaacacgctggcgcaacca
caggcgcaggatccgctgggcctcacccgcgcgcagtggcacgccgatccgcgccaggcg
gtggacgcggcattcgcgttcgacacgcgcaagcgcgtgcaacagcaacaactgggtgcg
atctggaacgtcgaaggcgcgcgcgatgacgtgcgcctgatgggctacgcggggcggcgg
gccgtgacccaggtgctgtcgatcccgcctttcgcgcagcaaagccccctcagcgcaggt
ggcgtggtcgacctggacggcggctacggcggcgccgacgcgcgctggacccaccgcggc
caggcgttgggtcgcccgctcgaatgggtgctgggtacgagctgggacgtgcaggaccag
caccggcgcggctacgagaacttcatcggcgacaccctcggcgtggtgggcgcgctgcgc
cgcgacgagcacgaccgcgtgcacgacttcgaccagtacgggcagctgtactggcatgtc
gccgagcactggtcgctgctgctcggcgcgcgccatagcgaggtggccttccatgtgcgc
gaccgctacgtgaccgccgccaatccggacgacagcggccaggtgcgctatcgcgccatc
acgccggtggcgggcgtcgtctaccggcccggcgcgcaggtgcggctgtacgccagttac
ggcgaaggcttcgagacgcccaccttcaacgaactgggttaccggcgcgacggcggcgcg
ggactggcgctcgacctgtcgccagcgcgcagccgcaacgaggaactggggctgaagtgg
cagccgcatgatggcgtgggcgtcgagcttgcgctgttccgcgcggacagccgcgacgaa
ctggcggtggccagcaaccacgacggccgctcgacctaccgcaacgtgggccgcagccgc
aggcagggcgcggagctggcggtcgatggcgacctcggcgctggctggcggctgcagctg
ggcatgacctggctcgacgcgcgtttccgcagcggcttcctcgcctgttccggcacgccc
tgcatcgttcccgacctgccggtgccgcccggtacgcgcattcccggcgtgccgcggcgc
tacggctcgctgcgcctggaacgcggcggcgagctcggctggcgtggtggcatcgaactc
gacggcgcgggcgcggtgccggtggacgatcgcaacagcgccatggcgccgggcttcctg
cgcacgggcctcgacctcggctacgggatggcgctgggacgcacgcggctgcacgtgagc
gcgcgggtggacaacttgtttgaccggcgcatcgtcggctcagtcatcgtcaacgaaggc
aatggccgctattacgagccggcgccgggtcgcagcatgtcgcttggactgcgcctggag
ctgtga
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