Frateuria edaphi: LQ772_16900
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Entry
LQ772_16900 CDS
T08888
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
fed
Frateuria edaphi
Pathway
fed00300
Lysine biosynthesis
fed00470
D-Amino acid metabolism
fed01100
Metabolic pathways
fed01110
Biosynthesis of secondary metabolites
fed01120
Microbial metabolism in diverse environments
fed01230
Biosynthesis of amino acids
Module
fed_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LQ772_16900 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LQ772_16900 (dapF)
Enzymes [BR:
fed01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LQ772_16900 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UGB45630
LinkDB
All DBs
Position
complement(3659698..3660534)
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AA seq
278 aa
AA seq
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MRFSKMHGIGNDFVVVDARDVPLALAPAQIRALADRHTGIGCDQLLSVEAARDPSCAFYY
GIWNADGSPSGQCGNGVRCVAAWLHRAGALALDTPVRIESPSGPVGVRVLDAHRVTVDMG
EPVFEPSRIPLAAEGSAEFYPLSLGEDSVQAGAVSMGNPHVVVPVEDLADPALARLGPQL
TGHPRFPAGANAGFVQIVGRGHLRLRVHERGSGWTQACGTGACAAMAVLRRRGHVDESVQ
VDLPGGRLQIDWAGPGHTLWMTGPAAFAFEGEWSPGVA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttttccaagatgcacggcatcggcaacgacttcgtcgtggtcgatgcgcgcgat
gtcccgctcgcgctcgcaccggcgcagatccgcgcgctggccgatcgccataccggcatc
ggctgcgaccagttgctcagcgtggaagccgcccgcgatccgtcctgcgcgttctactac
ggcatctggaacgccgatggcagcccctcgggccagtgcggcaacggcgtgcgctgcgtg
gcggcgtggctgcatcgcgccggtgcgctggcgctggacacgcccgtgcgcatcgagagc
ccctccggtccggttggcgtgcgcgtgctggatgcgcaccgcgtgacggtggacatgggc
gaaccggtgttcgagccctcgcgcatcccgttagcggcggaagggtcggccgagttctat
ccgctctcgctgggcgaggactccgtgcaggctggtgccgtatcgatgggcaatccgcac
gtggtggtccccgtcgaggacctggccgatcccgcgctcgcgcggctgggtccgcagctc
accggccacccgcgctttcccgcgggcgccaacgccggcttcgtgcagatcgtgggtcgc
ggccacctgcgcctgcgcgtgcacgagcgcggcagcggctggacgcaggcctgcggcacc
ggtgcgtgcgccgccatggcggtgctgcggcggcgtgggcacgtggacgaaagcgtccag
gtcgacctgcccggcggacgcctgcagatcgactgggccggtcccggccacacgctgtgg
atgaccgggcccgcggcattcgccttcgagggcgagtggtcgcccggcgttgcgtag
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