KEGG   Frateuria edaphi: LQ772_16900
Entry
LQ772_16900       CDS       T08888                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
fed  Frateuria edaphi
Pathway
fed00300  Lysine biosynthesis
fed00470  D-Amino acid metabolism
fed01100  Metabolic pathways
fed01110  Biosynthesis of secondary metabolites
fed01120  Microbial metabolism in diverse environments
fed01230  Biosynthesis of amino acids
Module
fed_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:fed00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LQ772_16900 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LQ772_16900 (dapF)
Enzymes [BR:fed01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     LQ772_16900 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Pro_racemase CntK_N
Other DBs
NCBI-ProteinID: UGB45630
LinkDB
Position
complement(3659698..3660534)
AA seq 278 aa
MRFSKMHGIGNDFVVVDARDVPLALAPAQIRALADRHTGIGCDQLLSVEAARDPSCAFYY
GIWNADGSPSGQCGNGVRCVAAWLHRAGALALDTPVRIESPSGPVGVRVLDAHRVTVDMG
EPVFEPSRIPLAAEGSAEFYPLSLGEDSVQAGAVSMGNPHVVVPVEDLADPALARLGPQL
TGHPRFPAGANAGFVQIVGRGHLRLRVHERGSGWTQACGTGACAAMAVLRRRGHVDESVQ
VDLPGGRLQIDWAGPGHTLWMTGPAAFAFEGEWSPGVA
NT seq 837 nt   +upstreamnt  +downstreamnt
atgcgcttttccaagatgcacggcatcggcaacgacttcgtcgtggtcgatgcgcgcgat
gtcccgctcgcgctcgcaccggcgcagatccgcgcgctggccgatcgccataccggcatc
ggctgcgaccagttgctcagcgtggaagccgcccgcgatccgtcctgcgcgttctactac
ggcatctggaacgccgatggcagcccctcgggccagtgcggcaacggcgtgcgctgcgtg
gcggcgtggctgcatcgcgccggtgcgctggcgctggacacgcccgtgcgcatcgagagc
ccctccggtccggttggcgtgcgcgtgctggatgcgcaccgcgtgacggtggacatgggc
gaaccggtgttcgagccctcgcgcatcccgttagcggcggaagggtcggccgagttctat
ccgctctcgctgggcgaggactccgtgcaggctggtgccgtatcgatgggcaatccgcac
gtggtggtccccgtcgaggacctggccgatcccgcgctcgcgcggctgggtccgcagctc
accggccacccgcgctttcccgcgggcgccaacgccggcttcgtgcagatcgtgggtcgc
ggccacctgcgcctgcgcgtgcacgagcgcggcagcggctggacgcaggcctgcggcacc
ggtgcgtgcgccgccatggcggtgctgcggcggcgtgggcacgtggacgaaagcgtccag
gtcgacctgcccggcggacgcctgcagatcgactgggccggtcccggccacacgctgtgg
atgaccgggcccgcggcattcgccttcgagggcgagtggtcgcccggcgttgcgtag

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