Flavobacterium enshiense: LZF87_04965
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Entry
LZF87_04965 CDS
T08644
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
feh
Flavobacterium enshiense
Pathway
feh03030
DNA replication
feh03430
Mismatch repair
feh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
feh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LZF87_04965 (dnaE)
03430 Mismatch repair
LZF87_04965 (dnaE)
03440 Homologous recombination
LZF87_04965 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
feh03032
]
LZF87_04965 (dnaE)
03400 DNA repair and recombination proteins [BR:
feh03400
]
LZF87_04965 (dnaE)
Enzymes [BR:
feh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LZF87_04965 (dnaE)
DNA replication proteins [BR:
feh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LZF87_04965 (dnaE)
DNA repair and recombination proteins [BR:
feh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LZF87_04965 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UOK43474
LinkDB
All DBs
Position
1095962..1100485
Genome browser
AA seq
1507 aa
AA seq
DB search
MYLIFDTETTGLPRSWSAPITDTDNWPRCIQIAWQLHDEMGNLVEHQDYLVKPEGFNIPY
DAERIHGISTELAMEQGIPLMEVLEKFNLALSKAKFIVGQNVGFDVNIMGCEFHRMNIGS
DMVKMSVLDTCTETTAELLKLPGGRGGKFKLPTLTELHQYLFGEPFAEAHNATADVEATT
RCFLELIKREVFTKEELDVNEDYYRDFRENNPQEIKLIGLKHINLKKASDEIRERLKKIQ
HEDVGQSVSEEVKKDLEHAAFAHLHNHSQFSVLQSTISINALVSAAVKNKMPAVAMTDVG
NMMGAFHFVSAVLNHNKGAEAKNKAAEENGETPSETIVKPIVGCAFNICDDHKDKTKKDN
GYQVVLLAKNKKGYHNLAKMASIAYTDGFYYVPRIDRAVVEKYKEDIIVLSGNLYGEIPS
KILNIGENQAEEALVWWKTQFGEDFYIEVMRHNQEDENRVNKTLIDFARKHNIKLIATNN
TYYVAKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSETEMKKLFSDLPE
AIINIQEIIDKVEAYSLYRDVLLPKFDIPEEFVVEEDKADGGVRGENAYLRHLTMEGAKR
RYEDITPDIQERLDFELLTISNSGYPGYFLIVQDFIAEARKMGVSVGPGRGSAAGSAVAY
CLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGLVMDYVINKYGANQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADRIAKLIPAMMPGKWNLARFLAEDESEVKKALKSSE
EFDRVKELIAIANEEDLAGETIQQAKVLEGSLRNTGIHACGVIITPSDITNYVPVTTAKD
SDLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKYRLGIELDPDNFPIDDQKTY
ELFQRGETVGVFQYESAGMQKYMKDLKPTVFGDLIAMNALYRPGPLEYIPSFVRRKNGLE
EITYDLDACEEYLGETYGITVYQEQVMLLSQKLANFSKGDADVLRKAMGKKQKDVLDKMK
SKFIDQAMANGHDAKKLDKIWTDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMA
AVLSNNMNDIKQVSFFMEECKRMGLAVLGPDVNESFYKFTVNEEYAVRFGMGAIKGVGEG
AVRTIVECRKDGKYKSIFDLAKRIDLRAANKKAFENLALAGGFDCFSNTHRAQYFHTDGD
NSTFLEKAMRYGSKFQENENSSQVSLFGDASEVQIPEPVVPPCEEWNTMQKLAQEKEVVG
IYISGHPLDDYKFEMKYFCNTKLDALKDLTPFVGKNISVGGIVTNVQHRVAKNGKGWATF
NLEGYDESYEFRIFDEEYLKFRHYLGQNHFVYIRLNVKEGWTNKETGKKSDPRLQFIDVL
QLQDVLQKFAKKLILQFSVVDLREQLIMELNEIFKENPGEATVTFEVMELERVKKIVEVP
IVSDMNDVDEISDSEDSLDEVEMTVSEEKEEIKVVTKLTMPSRKLKIGISNAMLSELERL
QINFKLN
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaattttcgataccgaaaccaccggattaccacgaagttggtcggcacctatt
acggataccgataactggccgcgatgtattcaaattgcgtggcagttacatgatgaaatg
gggaatcttgtcgaacatcaggattatctggtaaaacctgaaggtttcaacattccttat
gatgccgaaagaatccatgggatttccacggagttggctatggaacaaggtattccgtta
atggaagtgcttgaaaaattcaacttagccttgtcaaaagctaaatttatcgtcgggcaa
aatgttggtttcgacgtgaatatcatggggtgtgaatttcaccgaatgaatatcggttcg
gatatggtaaaaatgtctgttttggacacttgtactgaaaccacggccgaattgctgaaa
ctacccgggggtcgtggcggaaaattcaaattgcctacattaaccgaattacatcaatat
ttattcggagagccttttgcagaagcacacaacgcgactgccgacgtggaagcgaccaca
agatgtttcctcgaattaatcaaacgtgaggtttttaccaaagaagaacttgatgttaac
gaagattattaccgtgatttccgtgaaaacaatccgcaggaaatcaagctgattgggtta
aagcatatcaacctgaaaaaagcttccgatgaaattcgtgagcgtttaaagaagatccag
cacgaagatgttggtcagtctgtatcagaagaagttaagaaggatttagaacatgctgct
tttgcgcatctgcacaatcattcccaattctcggtactgcaatccactatttcgatcaat
gctttggtaagtgcggcggttaaaaacaaaatgccggcagttgccatgaccgatgtaggg
aacatgatgggggcttttcacttcgtgagtgccgttcttaatcataataaaggcgccgaa
gccaaaaataaagcagccgaagaaaacggtgaaactccatccgaaacgatagtaaaaccg
attgtaggttgtgcgtttaacatctgcgacgaccacaaagacaaaaccaaaaaagacaac
ggatatcaggtagtgttgttggcaaagaacaaaaagggctatcacaacctggcaaaaatg
gcatccattgcctataccgacggattttattatgtgccgcgaattgaccgagcggtagtc
gaaaaatataaagaagacattattgttttgtcggggaacctgtatggggagatcccgagc
aaaattttaaatattggtgaaaaccaggcggaagaagcgttggtttggtggaaaacccaa
tttggcgaggatttctatattgaagtcatgcgtcataatcaggaggatgaaaaccgcgta
aataaaacgcttatcgatttcgcccgaaaacacaatataaaactgattgcaactaataat
acgtattacgttgccaaggaagatgctaatgcacacgatattttattatgcgtaaaagac
ggtgagaagcaggcgactccaattggccgaggacgaggttatcgttatggattgcctaat
caggaatactatttcaaatcggagacagaaatgaaaaagctgttctctgatttgccggaa
gccatcatcaacattcaggaaatcattgataaagtggaagcgtattcgttgtaccgcgac
gtattgcttcctaaattcgatattccggaagaatttgtggtagaggaagataaagcggat
ggaggtgtacgaggtgagaatgcttatttgcgacatctcaccatggaaggagccaaaaga
aggtatgaagatattacacccgatattcaggaacgactggattttgagttactaactatt
tccaattcaggttatcccggttactttttgattgtacaggatttcattgccgaggcacga
aaaatgggggtttcagtagggcctggtcgtggttccgcagcgggttctgcggtagcatac
tgtttagggattaccaatatcgacccgattaaatacgatttgctttttgagcgtttcctg
aatccggaccgtgtgtccatgcccgatatcgatatcgattttgatgacgaaggccgcgga
ttggttatggattacgtaatcaataaatacggagccaatcaggtggcacagattatcact
tatggtaaaatggcaacaaaatcggcgattcgtgatacggcacgtgtattggatttgcct
ttatttgaagccgacaggattgcgaaacttattccggccatgatgccaggtaaatggaat
ctggcccgtttccttgcggaagatgaaagcgaagtcaaaaaagccctgaaatcatcggaa
gaattcgacagggttaaagaactaatagcgatcgccaacgaagaagatcttgccggggaa
accatccagcaggcaaaagttctggaaggatcgcttcgaaacaccggaatccatgcctgc
ggtgtaatcattacgccgagtgatattaccaactacgtaccggtaaccacagcaaaagat
tcagatttgtatgtaacacagttcgacaactctgtagcggaaagtgccggtttgctgaaa
atggacttcctggggctgaagacgctaacattgattaaagacacggttaaattggtgaaa
taccgtttgggaatcgaactcgatccggacaatttcccaattgatgaccaaaaaacatat
gagttgttccaaagaggagaaacggttggggttttccaatacgagtcggccgggatgcag
aagtacatgaaggaccttaagcctacggtttttggtgaccttatcgcgatgaatgcgttg
taccgtccggggcctttggaatacattccttctttcgtccgaagaaaaaacggattggaa
gagattacctatgatttggatgcctgcgaagaatatttaggagaaacatacgggattacg
gtgtatcaggagcaggtgatgcttttgtcacagaagcttgcgaatttctccaaaggtgat
gccgacgtacttcgtaaggcgatgggtaaaaagcagaaagatgttttggataagatgaaa
tccaaattcatcgatcaggcaatggccaacgggcacgatgcaaaaaaactggataagata
tggaccgactgggaggcgtttgcgagttatgccttcaataaatcccactccacctgttat
gcatggattgcttaccaaacggcttatctgaaagcacactatccggccgagtatatggcg
gcggtactttccaataacatgaacgatatcaagcaggtttcgttctttatggaagagtgt
aagcgtatgggactggcggttttaggtccggatgtgaatgaatcgttctataagtttacc
gtaaacgaagagtatgcagttcgttttggaatgggcgcaattaaaggtgtaggggaaggt
gccgtacgaactattgtagagtgccgaaaagacggaaaatacaaatccatattcgatttg
gcgaagcgtatcgatttacgtgctgccaataaaaaagcattcgaaaacttagctctggca
ggtggattcgattgtttttccaatacccatcgtgcgcaatatttccataccgatggcgat
aacagtacgttcttagagaaagccatgcgttatggttctaagtttcaggagaatgagaat
tcgtcgcaggtgagtttgtttggagatgcctctgaagtgcagattcctgagcctgtcgtg
ccaccgtgtgaagagtggaatacgatgcaaaaactggcgcaggagaaagaagtggtgggg
atttatatttccggtcatccgcttgacgattacaagtttgaaatgaaatatttctgtaat
acgaaactggatgcgttgaaagatctgacgccatttgtagggaaaaatatctcagtggga
ggaattgtaaccaatgtgcaacaccgggttgccaagaacggtaaaggctgggctactttc
aatttggaaggttacgacgagagttacgaattccggatttttgatgaggaatacttaaag
ttccgtcattatctggggcaaaatcactttgtgtacatccgtttgaatgtaaaagaaggc
tggacgaacaaggaaaccggtaagaaatccgatccgcgtttgcagtttattgacgtttta
caacttcaggatgtattgcagaaatttgccaaaaaactcatactgcaattttctgtggtt
gatttacgtgaacaattaatcatggaactcaacgaaattttcaaagaaaatcctggtgaa
gctactgtgacttttgaagtgatggagctggaacgagtgaaaaaaattgtggaagtgcct
atagtgagtgatatgaatgatgttgatgaaatttcagattctgaagattcacttgatgaa
gtagaaatgaccgtttctgaagaaaaagaagaaattaaagtggtgaccaaactcaccatg
ccaagccgaaaactcaaaattggtatttcaaatgctatgttgagtgagttggagcgtttg
cagatcaacttcaaattgaattaa
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integrated database retrieval system
