Flavobacterium enshiense: LZF87_04975
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Entry
LZF87_04975 CDS
T08644
Name
(GenBank) RNA-binding S4 domain-containing protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
feh
Flavobacterium enshiense
Brite
KEGG Orthology (KO) [BR:
feh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
feh03009
]
LZF87_04975
Enzymes [BR:
feh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LZF87_04975
Ribosome biogenesis [BR:
feh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LZF87_04975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UOK43476
LinkDB
All DBs
Position
complement(1101059..1101943)
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AA seq
294 aa
AA seq
DB search
MIGKGNNKKGSTSKKPGSGSKKSGPAKATFKKDDKKTGFPKAKPAFDKKPKAPKKPANPD
EIRLNKYISNSGVCSRRDADIYIQSGNVKVNGEVVTEMGYKVQPNDVVNFDGSLITPEKK
EYILLNKPKGFTTSKEEDMNANNVLDLVRGATKAKLQPVGRMDKTTTGLLLFTNDTDIVR
KFTIPNQRSSKVYQVTLDKNLKFEDLERISSGLTIDNHRVFVEEVSYIEDQPKSEIGLKM
KTSNVKVVRSIFEHLKYDVLKVDRVVFAGLTKKNLPRGNWRFLTEQEIINLRNI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatcggaaaaggaaataataaaaaaggttctacgtctaaaaaaccaggctcgggttcc
aaaaaaagcggaccggctaaggctacttttaaaaaagacgataaaaaaacagggttccct
aaagcaaaacctgctttcgataaaaaacccaaagcacctaaaaaacctgccaatccggac
gaaatccgtctgaacaaatacatttctaattcaggtgtttgctcacgccgcgatgccgac
atttacatccaatccggaaacgtaaaagtaaacggtgaagtggttacggagatgggctac
aaagtacaaccgaacgacgttgtaaactttgacggaagcctaatcactcctgagaaaaaa
gaatacattttattgaacaaaccaaaaggattcacgacttccaaagaagaagacatgaat
gccaacaatgtattggatttggttcgcggtgcgacaaaagccaaattacagcctgttgga
agaatggataaaaccactactggtttgttgctattcaccaacgacacagatattgtccgc
aagttcacgattccaaaccaacgctcttcaaaagtgtatcaggttactttggacaaaaat
ctgaaattcgaagatttagagcggatttccagtggattgaccattgacaatcaccgtgtt
tttgtagaagaagtgtcctacattgaagaccaaccgaagagtgaaatcggtctaaaaatg
aaaacctccaacgtaaaagtggtgcgatccatttttgaacatttaaaatatgatgtttta
aaggtagaccgtgtggtttttgcaggtttaaccaaaaagaatttaccaagaggaaactgg
agattcctgaccgaacaggaaatcatcaacctgagaaatatataa
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