Flavobacterium enshiense: LZF87_11040
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Entry
LZF87_11040 CDS
T08644
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
feh
Flavobacterium enshiense
Pathway
feh03420
Nucleotide excision repair
feh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
feh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LZF87_11040
03430 Mismatch repair
LZF87_11040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
feh03400
]
LZF87_11040
Enzymes [BR:
feh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LZF87_11040
DNA repair and recombination proteins [BR:
feh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LZF87_11040
MMR (mismatch excision repair)
Other MMR factors
LZF87_11040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
UOK41841
LinkDB
All DBs
Position
complement(2462663..2464993)
Genome browser
AA seq
776 aa
AA seq
DB search
MQQIINQLNEAQRAPVLQKDGPMIVIAGAGSGKTRVLTVRIANLIHQGVDAFNILSLTFT
NKAAREMKKRITDIVGPEAKNLWMGTFHSVFAKILRIEADKLGYPSNFTIYDAQDSVRLI
GQIIKEMQLDKDVYKPKQVFGRISSYKNSLITVKAYFNNPELQEADAMSKKPRMGEIYNQ
YVERCFKSGAMDFDDLLLKTNELLNRFPDVLAKYQDRFRYILVDEYQDTNHSQYLIVRAL
SDRFHNICVVGDDAQSIYAFRGANINNILNFQKDYEGVQTYRLEQNYRSTRNIVEAANTI
IDKNKTKLDKVVWTANEFGPKIKIHRSLTDGEEGRFVASTIFEEKMQKQMMNGQFAILYR
TNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLCYLRLVINPKDEEALIRVINYPA
RGIGNSTIEKLTVAANHYKRSIFEVMEHIEKIDLKLTSGTKNKLQDFVMMIKSFQVINEN
QDALYLTDHVTKKTGLIQELKKDATPEGIARIENIEVLMGGIKDFIEGQKEVDGARGALS
EFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPTVFIVGMEEDLFPSAMSMNTRSEL
EEERRLFYVALTRAEHQAYLTYAQSRYRWGKLVDSEPSRFIEEIDPQYLEYLTPVETNYR
YKPMINTDIFGDVDKSKLRLSKPVAGTPPKYITNNEPKPDLNIRKLKPVSGAAPVGKANL
FDGNLSIGDIVMHERFGKGQILNTEGAGADKKAEIKFEVGGIKKLLLRFAKLDVIG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagataataaatcagcttaacgaagctcagcgtgcgcccgtactgcaaaaagac
ggaccaatgatagtgattgcgggtgccggttccggaaaaactcgtgtgcttacggttcgt
attgccaatctaattcatcagggcgttgatgcttttaatatcttatcgcttacgtttacc
aataaggcggcacgtgagatgaaaaaacgtattaccgatattgtaggtccggaagccaaa
aatctttggatgggaacctttcactcggtttttgctaagattttgcgtatcgaagctgat
aaattaggatatccaagtaatttcaccatttatgacgctcaggattctgtgcgtttaatc
ggacaaattatcaaggagatgcagctggacaaggatgtctacaaaccaaaacaggttttc
ggccgaatttcgtcgtataagaacagtcttattactgtaaaagcgtatttcaacaatccg
gaattgcaggaagccgatgcgatgagtaaaaaaccgcgtatgggtgagatttacaatcag
tatgtggagcgttgttttaaatccggagccatggattttgatgatttgttgttgaaaacc
aatgaattgttaaatcgttttccggatgtattggcaaagtatcaggatcgtttcagatat
attttggtggatgagtatcaggatacaaaccattcgcaatatttgattgttcgcgcttta
tccgacagattccataatatctgtgtggtaggtgatgatgcgcagagtatctatgctttc
cgcggagcgaacatcaataatattttaaatttccagaaggattacgaaggtgttcaaacg
tatcgtttggagcagaattaccgttccaccagaaatattgtggaagccgccaatacgata
atcgacaagaataaaacaaagttggacaaagtggtttggacagcgaatgaattcggtccg
aaaattaaaatccaccgcagtttaactgatggggaagaaggccgttttgtagcttccacc
atttttgaagagaagatgcaaaagcagatgatgaacggacagtttgctattttgtaccgt
accaacgctcaatcacgagcaatggaagatgctttgcgtaaaagagatattccgtaccga
atttacggaggattgtcgttctatcagcgcaaggaaattaaagacgtgttgtgctatttg
cgtttggttatcaatccgaaagacgaggaggcactgattcgcgtaattaattatccggca
agaggaattggtaattctacaattgaaaaattgacggtagcggccaatcattataagcgt
tccatctttgaagtcatggaacacattgaaaaaatcgatttgaaactgacatcgggaact
aaaaacaaattacaggattttgtaatgatgattaagagtttccaggttatcaacgaaaat
caagatgcgctttatctgactgatcatgtaaccaagaaaactggtttaattcaggaacta
aaaaaagatgccactccggaaggtatcgcccgtattgaaaacattgaggttttaatggga
ggtatcaaggattttatcgaaggtcaaaaagaagttgatggtgcccgtggtgctttatct
gaattccttgaagatgtggctttggctaccgatttggataatgataccggtgatgatgac
cgtgtagcattaatgaccattcacttggcaaaaggattggaattcccgacggtttttatc
gtaggtatggaagaagatttgttcccgagtgcgatgagtatgaacacccgaagcgaactg
gaagaagaacgccgattgttttatgtagccttaacccgtgcggaacatcaggcttattta
acgtatgcccaatcgcgttaccgttggggaaaacttgtggatagcgagccatcccgtttt
atcgaagaaattgatccacaatatttggaatatttaacaccggtggagacgaattaccgt
tacaaaccaatgattaacactgatattttcggagatgtagacaaatcgaaacttcgtttg
tcaaaacctgttgcaggtacgcctccgaaatatattacaaataatgagccgaaacctgac
ttaaatattcgtaaattgaagcctgtttcaggagcggcacctgttggtaaagccaatttg
tttgacggtaatctatcaataggggacatcgtaatgcatgagcgcttcggaaaagggcag
atcctgaatacggaaggagcgggggcagacaaaaaagcagaaatcaaatttgaagtcgga
ggaattaagaagttattgttgcgttttgcgaagctggatgtaattggatag
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