Flavobacterium enshiense: LZF87_12080
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Entry
LZF87_12080 CDS
T08644
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
feh
Flavobacterium enshiense
Pathway
feh00260
Glycine, serine and threonine metabolism
feh00460
Cyanoamino acid metabolism
feh00630
Glyoxylate and dicarboxylate metabolism
feh00670
One carbon pool by folate
feh00680
Methane metabolism
feh01100
Metabolic pathways
feh01110
Biosynthesis of secondary metabolites
feh01120
Microbial metabolism in diverse environments
feh01200
Carbon metabolism
feh01230
Biosynthesis of amino acids
feh01240
Biosynthesis of cofactors
feh04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
feh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LZF87_12080
09102 Energy metabolism
00680 Methane metabolism
LZF87_12080
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LZF87_12080
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LZF87_12080
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LZF87_12080
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LZF87_12080
Enzymes [BR:
feh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LZF87_12080
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
DUF5655
Motif
Other DBs
NCBI-ProteinID:
UOK42041
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All DBs
Position
complement(2684897..2686171)
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AA seq
424 aa
AA seq
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MQRDEQIFDLILEEQDRQIHGLELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGC
EVVDVIEQIAIDRAKALFGAEYVNVQPHSGSQANSAVLAACLKPGDKILGFDLSHGGHLT
HGSPVNFSGKLYQTTFYGVEKETGRLNYDIIQEIATKEQPKLIIAGASAYSRDMDFKRFR
EIADSVGAILMADIAHPAGLIAKGLMNDPVPHCHIITTTTHKTLRGPRGGMIMMGKDFEN
PWGLTTPKGEIRMMSHILDMSVFPGNQGGPLEHIIAAKAVAFGEALTDEFFRYAMQVQKN
AKAMAEAFVKRGYNIISGGTDNHMMLIDLRNKNISGKEAENALVKADITVNKNMVPFDDK
SPFVTSGIRVGTPAITTRGLVESDMETIVDMIDRVIMNHTNEEVLEQIGEEVYDMMSERA
MFVF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacgaacaaattttcgacttaattcttgaagaacaagacagacaaatccac
ggattggaacttattgcatctgagaactttgtaagcgaccaagtaatggaagcagctggt
tcggtactaaccaataaatatgcagaaggctatcctggaaaaagatattatggtggatgt
gaggtagtggatgttatcgagcaaattgccatcgacagagcaaaagctttattcggagct
gagtatgtaaacgtacaaccgcattcaggttctcaggcaaattcagctgttcttgcagcg
tgtttgaaacctggtgataaaattttaggtttcgatttatctcacggtggtcatttgaca
catggttctccagtaaacttttcaggtaaattataccagacaactttttacggagtagag
aaagagactggtcgtttgaattatgatatcattcaggagatcgctactaaagaacagcct
aaattaatcatcgcgggtgcttcagcttattcccgtgacatggatttcaaacgtttccgt
gaaatcgctgattctgttggcgctattttaatggcagacattgcacaccctgcaggttta
attgccaaaggattaatgaatgatcctgttcctcattgccatattatcacgacaactaca
cacaaaacattacgcggaccaagaggcggaatgatcatgatgggtaaagatttcgaaaac
ccttggggcttaacaactccgaaaggcgaaatcagaatgatgtcacacatattggatatg
tcggttttccctggaaatcaaggtggaccattggaacacatcatcgctgctaaagcagtt
gctttcggtgaggcgttaacagatgagtttttccgttatgcaatgcaggttcagaaaaat
gccaaagcgatggcggaagctttcgtaaaaagaggctacaacatcatttctggcggaact
gataaccatatgatgctgatcgatttgagaaacaaaaacatttcaggtaaagaagctgaa
aatgctttggtaaaagcagatattacggttaacaaaaatatggttccgtttgatgataaa
tctcctttcgtgacttcaggaatacgtgtgggaactccggcaatcacaacccgtggtctg
gttgaatcagatatggaaacgattgttgatatgattgacagagtaatcatgaaccatact
aacgaggaagttttagaacaaattggtgaagaggtttacgatatgatgagcgagcgagcg
atgtttgtattctaa
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