Flavobacterium enshiense: LZF87_12220
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Entry
LZF87_12220 CDS
T08644
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
feh
Flavobacterium enshiense
Pathway
feh03030
DNA replication
feh03430
Mismatch repair
feh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
feh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LZF87_12220
03430 Mismatch repair
LZF87_12220
03440 Homologous recombination
LZF87_12220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
feh03032
]
LZF87_12220
03400 DNA repair and recombination proteins [BR:
feh03400
]
LZF87_12220
Enzymes [BR:
feh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LZF87_12220
DNA replication proteins [BR:
feh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LZF87_12220
DNA repair and recombination proteins [BR:
feh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LZF87_12220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
DUF7508
Motif
Other DBs
NCBI-ProteinID:
UOK42069
LinkDB
All DBs
Position
2713598..2714959
Genome browser
AA seq
453 aa
AA seq
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MYAILDIETTGGQYNEEGITEIAIYRFDGHEIVDQFISLVNPEIPIQPFVVKLTGINNAM
LRSAPKFYEVAKRIIEITDGCTIVAHNASFDYRILRTEFRRLGFDFSKPTLCTVELSKKL
LPGHHSYSLGKLVRALGIPMADRHRATGDAMATVKLFKMLLSKDLEKEIVKSYIKTEIKA
GISPKLLDIIDGVPSKTGIYYIHREDGTIIYIGKSKNIKKRVNQHFTSSDRKAKKLQNEV
FAVTFEETGSELIALLKESEEIKVNRPPYNRSQRKTIFPFGLYAEKNKDGYIALQVQKTD
RRKKEITSFSTLIEGKSFLHKITEENNLCQKINGLYDTKKSCFQYDLKQCYGACIGEEAP
VEYNKRVTHFIENNQLQNQSMIIVDQGRNVNERSAVLIENGIYKGYCFYDLNYQINNIDI
LKNIIIPMENNRDSRNIILNYVRKKKVIKIVRF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaattttagacatagaaaccaccggaggacaatacaacgaagaaggaattact
gaaattgccatctatcgcttcgacggacatgaaattgtggaccaatttatcagtttggtc
aatccggaaatccctattcagccttttgtggtgaagcttaccgggataaacaatgctatg
ctgcgttcggcaccaaagttttatgaggtagcgaaacgcataattgaaattacagacgga
tgtactatcgtggcacataatgcgtcgtttgattaccgaatcctccgcacagaatttcga
cgactgggctttgatttcagcaaacctacgctttgtactgtggaactttctaaaaaattg
cttcccggacatcattcctatagtttgggcaaattagtcagagccttgggaattcctatg
gccgacagacatcgtgccaccggagatgccatggcaactgtaaaacttttcaaaatgctt
ttatctaaagacttagaaaaagaaatcgtgaaaagttatatcaagaccgaaataaaagcg
ggcatatctcccaaattattggatatcattgacggtgtcccttcaaaaacagggatttat
tacatccatcgcgaagacgggaccatcatttacatagggaaaagcaagaatatcaaaaaa
agggtaaatcagcactttaccagttccgaccgtaaggcaaaaaaactgcaaaatgaggtt
tttgctgtaacttttgaagaaacagggagcgaattgatcgcgcttttaaaagaaagtgaa
gaaatcaaagtaaaccgccctccttataacagatcgcaacgaaaaaccattttcccattt
ggactttatgccgaaaaaaacaaggatggttatattgctttacaggtacaaaaaaccgat
cgcagaaaaaaggagattacttctttttccaccttgattgaagggaaatcatttttacat
aaaattacggaagagaataatctctgccagaaaataaacggcttatatgataccaaaaag
agttgttttcagtatgatttaaaacaatgctacggtgcgtgtattggggaagaagctcct
gtggaatacaacaaacgcgtcactcattttatagaaaacaatcagctgcaaaaccagagt
atgataattgtggatcagggacgaaacgtgaacgaacgaagcgctgtactgattgaaaac
ggaatctacaaaggctattgtttttatgatttgaattatcagattaacaatattgacatc
ctgaaaaacataattatcccgatggaaaacaacagggattcgagaaacattattctgaat
tacgtccgaaaaaagaaagttattaaaattgtcaggttttaa
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