Ferruginibacter albus: K9M53_00275
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Entry
K9M53_00275 CDS
T07524
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fei
Ferruginibacter albus
Pathway
fei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K9M53_00275 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fei03019
]
K9M53_00275 (recQ)
03400 DNA repair and recombination proteins [BR:
fei03400
]
K9M53_00275 (recQ)
Enzymes [BR:
fei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K9M53_00275 (recQ)
Messenger RNA biogenesis [BR:
fei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K9M53_00275 (recQ)
DNA repair and recombination proteins [BR:
fei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K9M53_00275 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
UAY52144
LinkDB
All DBs
Position
complement(60116..62407)
Genome browser
AA seq
763 aa
AA seq
DB search
MTTTKAKPKPKAEKPVKETAVKGKTIKTSSKENNNLAAQLQEHFGFEGFKGQQEVIIKNL
LAGKDTFVIMPTGGGKSLCYQLPAIISEGCAIIVSPLIALMKNQVDLVRSYSSKDDVAHF
LNSTLNKGQQKVVRDDLVAGKTKMLYVAPETLTKEENIEFFKDLNVSFFAVDEAHCISEW
GHDFRPEYRRLREMMEMINEKAPMIALTATATPKVQSDIVKNLGLRNADIYISSFNRSNL
YYEVLPKIKKDQTIKSIVRFISQNKGKSGIIYTLNRKTTEELAEMLMANGIKAVAYHAGL
DAKLRAERQDLFLNEDTQVIVATIAFGMGIDKPDIRFVIHYNIPKSIENYYQETGRAGRD
GMEGKCILYYSHKDVSKLEHLMRDKPLSEREVGAQLINETVSFAESAVCRRKILLNYFGE
EYNTKQCNCMCDNCNNPKELIETKAETQQALKVIKGLDEQFTMDYLLHILLGKPNPQVKM
FRHDEKDFFGIGKDKDEHFWNSLLRQMLLERLIEKDIEEYGVLKFTKKGEAFLKKPTSFK
IVLNNLFEGADADDDEGAPAIGSSSAADEKLLEMLKNLRKQVAKEKNLPPFVIFLEGTLE
DMATMYPTTIEELEKCQGVSKGKAIRYGKKFIELIAKFVEENEIERPDDFVMKGVVNRNN
NKIFIIQNVDKKIPLETIAKNKDLRMDELLEEMETIVASGTRLNLDYAIDELVDEYEQDE
IIDYFKSCETSSLQAAQEELADSNFDWEQLKIMRIKFLSVYGN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacaaaagcaaaacccaaacctaaagcagaaaaacctgttaaagaaactgct
gtcaaaggaaaaactataaaaacctcatcgaaagaaaacaataatcttgctgctcaattg
caagaacattttgggtttgaaggatttaaaggtcagcaggaagttatcattaaaaattta
ttagccggtaaagatacattcgtaataatgccgaccggagggggtaaaagcttatgctat
caattgcctgccattataagtgagggttgcgccattatcgtttctccattaattgcatta
atgaaaaaccaggttgacctggtaagaagctacagcagcaaggatgatgtagcccatttt
ttaaacagcacattaaataaaggacaacaaaaagtagttcgggacgacctggtagccgga
aaaacaaaaatgttgtacgtagctcctgaaacattgaccaaagaagagaacattgagttt
ttcaaagaccttaatgtatctttttttgctgtagatgaggcgcattgtatttctgaatgg
ggacatgattttcgtcctgagtatcgccgtttgcgggaaatgatggaaatgataaatgaa
aaagctcccatgatcgcactaacagcaacggctacaccaaaagtacaaagcgatatcgtc
aaaaatttaggacttcgcaatgcggatatttatatttcttcatttaatcgctccaatctt
tattacgaggtattacccaaaataaaaaaagatcaaactattaaaagtattgtccgcttt
atttctcaaaacaaaggaaagagtggcattatttacacccttaatagaaaaacaaccgaa
gaactggctgaaatgctgatggctaacggcattaaggcagttgcctatcatgccggacta
gatgctaagctgcgtgcagaacgacaggaccttttcttaaatgaagatacacaggtaatt
gttgccaccattgcatttggaatgggtatcgataagccggacattcgttttgtaattcat
tataacattccaaaatcgatagaaaattactaccaggaaaccggtcgtgcagggcgggat
ggaatggaaggaaaatgcatattgtattactctcataaggatgtttcaaaactggaacat
ttaatgcgagacaaaccattgagtgaacgtgaagtgggtgctcaattgatcaacgaaact
gtttcttttgcagaaagtgctgtttgccgcagaaagatcttattgaattattttggtgaa
gaatataataccaagcaatgcaattgcatgtgcgacaattgcaacaatcccaaagaactg
atcgaaaccaaagctgaaacacaacaggctttaaaagttattaagggtttggatgaacag
tttaccatggattacctgctacatattttattaggcaagcctaatccacaggtaaaaatg
ttccggcatgatgaaaaagatttttttgggatcgggaaagataaagatgagcatttctgg
aattctttattacgacaaatgcttttggaacgtttgatagaaaaagacatagaagaatat
ggcgtactgaaattcactaaaaaaggggaagcttttttaaaaaaacctacctcttttaaa
attgtattgaacaatttatttgaaggcgctgatgcagatgatgatgaaggcgcaccggca
attggcagcagcagtgctgcagatgaaaaactgctggaaatgctgaagaatctgcgcaag
caggtggctaaagaaaaaaaccttcctccctttgttatctttttagaaggtacgctggaa
gatatggcgacgatgtacccgactaccatagaagagttggaaaaatgccagggtgtaagc
aaaggaaaagccattcgttacggtaaaaaattcattgagctgatcgcaaaatttgttgaa
gaaaatgaaattgaacgtcctgatgattttgtaatgaaaggggttgtaaaccgtaataac
aacaagatattcatcatacaaaacgttgataaaaagattcccctggaaaccattgctaaa
aacaaggatttgcgaatggatgaattgttggaagaaatggaaacaattgttgcaagcggt
accaggctaaacctggattatgctattgatgaattagtagatgaatatgaacaggacgag
atcatagattactttaagtcgtgtgaaacaagcagcttacaagctgcacaggaagaatta
gcagacagcaattttgattgggagcaattaaaaataatgcgtattaagtttttaagcgta
tacggaaattaa
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