Ferruginibacter albus: K9M53_00595
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Entry
K9M53_00595 CDS
T07524
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fei
Ferruginibacter albus
Pathway
fei03420
Nucleotide excision repair
fei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K9M53_00595
03430 Mismatch repair
K9M53_00595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fei03400
]
K9M53_00595
Enzymes [BR:
fei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K9M53_00595
DNA repair and recombination proteins [BR:
fei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K9M53_00595
MMR (mismatch excision repair)
Other MMR factors
K9M53_00595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Viral_helicase1
DUF3799
DUF2800
Dna2
Motif
Other DBs
NCBI-ProteinID:
UAY52206
LinkDB
All DBs
Position
135930..139082
Genome browser
AA seq
1050 aa
AA seq
DB search
MPSYREVLQQKFSEEYDKLNLQQRKAVDTIEGPVMVIAGPGTGKTQILAARIGKILLETD
ALPENILCLTYTDAGTIAMRKRLVQFIGADAYKVNIYTFHAFCNDVIQENLSLFEKTSLD
PVSELERIELFKKLIDAFPKNHLLKRYRGDVYFEINNLQQLFSSMKREGWLPQFINSKID
EYINDLPLRDEYIAKRATKEFKKGDVRTDKIEEEKERMEKLRSAVNEFENYQKLLRQHSR
YDFDDMINWVIKAFEENKNLLANYQEKFQYILVDEYQDTSGTQNKLVQLLISYWEKPNVF
VVGDDDQSIYRFQGANVENMLEFANNYSKDLLTVVLSSNYRSTQPILDISKTLINKNEER
LVKQIEGLSKELLSSNKKINHLTNQPQIREYKSVKEEMAGITNEIETLIQQGVSAGKIAV
IYKENKYGLELTRYLQLKNIAVYSKRSINILEDPFINKILQLLRYLNAEHDIPYGGDEML
FEILHYDFYKIPPIEIAKLTVEVNSKKYNGELTSIRKLLNEKANTPAKTLFDVGLNENLK
NISIVLEGLIADVPNVTLQQLFENVVTKANILSYIMQSDKKIALLQLLTALFDFIKEETS
RNPTLNLEGLINIIDLMEKEGLPLPMIRISGSDKGVNLLTAHGSKGLEFEYVFFAGCNSS
SWEKKRKPGGGYKFPDTIFSLQPTKNLEEEELRRLFYVALTRAEKHLFISYSKFRNDGRE
IEPSMFIAEILEEHALPIETINLTTEELATFELLNFTAQAPEIDKAEEDFIDSLLEKFVM
NVTALNNYLKCPLEFYYKNLIRIPSGKSEATEFGSAVHHALEKLFRKMQEGKKDTFPPKE
ELIMDFQWYMHRHRENFTKEAFDRRMEYGDEVLSNYYDKYVNTWNKIVTVERNIRNVTNG
VPIKGKLDKLEFNGKEVNVVDYKTGDIDKAKPKLQAPNDKEPNGGDYWRQAVFYKILVDN
YEQKDWKVVSTEFDFIEPDKKKEYQKAKIVINPNDITTVTQQIAEVWQKIQERDFYTGCG
KEDCHWCNFVKENQLAVKLHELTEEEAGEF
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgccatcttatagagaagtcttgcaacaaaaattttcagaagaatatgataaactgaat
cttcagcaacgaaaagctgtggatactattgaaggtcctgttatggttattgccgggccg
ggtacaggtaaaactcaaattttagcagcacgtattggcaagattttattagagacagac
gccttgccggaaaatattctctgtcttacatatacagatgcaggcactattgctatgcga
aagcgcctggtgcaattcattggggccgacgcctacaaagtgaacatctatacttttcat
gctttttgtaatgatgtaattcaggaaaatttatcgctgtttgaaaaaacttctttagat
cctgtttccgaattagaacgaatagagttgtttaaaaaattgatagatgctttccccaaa
aaccatttgctgaaaagatacagaggcgatgtttattttgagataaacaatttacagcaa
ttgttttcatcgatgaaacgagaaggttggcttccgcaatttattaattcaaagatcgat
gaatacataaatgacctgcctttgcgtgatgaatacattgccaaacgtgcaaccaaagaa
tttaaaaaaggcgatgtgcgtactgataagatagaagaagagaaagagcgaatggaaaaa
ctgcgttcagccgtaaatgaatttgagaactaccaaaagttattgcgccaacatagtcgt
tatgattttgatgacatgatcaattgggtgataaaagcttttgaagaaaacaaaaacctg
ttagccaattaccaggaaaaatttcaatacattttggtagatgaataccaggatacaagc
ggcacgcaaaataaattggtgcaattgctcattagctattgggaaaaaccgaatgtgttt
gttgtaggtgatgatgatcaaagtatctatcgctttcagggagcgaacgtggagaacatg
ctggaatttgcgaataattattccaaagatctattaacggtagtgttgagtagtaactat
cgttctacacaaccaatactggatatttccaaaacactcatcaacaaaaacgaagaaaga
ttagttaagcaaatagaagggttgagcaaagagctgttatcatctaacaaaaaaataaat
cacttaaccaatcaaccgcaaataagggagtataagtctgtaaaagaagaaatggccggc
attaccaatgagattgagacactgattcagcaaggagtttcagctggtaaaatagctgtt
atctacaaagaaaataagtatggattagagcttacccgttatctacaattaaaaaatatt
gcagtttacagtaagcgaagcatcaatattttagaagatccttttatcaataaaattctt
caattgctgcgttacttaaatgcagaacatgatattccttacggcggagatgagatgttg
tttgagattctgcattacgatttttataaaatccctccgatagaaattgcaaaattgaca
gttgaggtcaactcaaaaaaatataacggcgaactaacatctatccggaaattattaaac
gaaaaagcaaacacacctgctaaaaccttgtttgatgttggactaaatgaaaatttaaaa
aacataagtattgttttagaaggtttaattgcagatgttcccaatgttacattacagcag
ctttttgaaaatgtggttaccaaggcaaacatactttcttacataatgcagagtgataaa
aaaatagcattgctgcaattgcttactgcattatttgattttattaaagaagaaacaagc
cgcaatccaacgttgaatttagaaggactgatcaatatcattgatctaatggaaaaagaa
ggtttgccattaccaatgataagaatctccggaagcgataaaggcgtgaacctattgaca
gcacacggttccaaaggattggagtttgaatatgttttctttgccggatgtaattcatca
agctgggaaaagaaaagaaaacccggtggcggctataagttcccagatactattttctct
ttacaaccaacaaaaaatttggaagaagaagaattgagacgcttgttttatgtggcgctt
acaagggctgaaaaacatctattcatttcttattcaaaatttagaaatgatggaagagaa
atagaaccctctatgtttatagcagagattttggaagagcatgctttacccatagaaaca
attaacttgacaactgaagaattggcaacttttgaattgctgaattttacagcacaagcg
ccggaaattgataaggctgaagaagattttatcgacagcttactggaaaagtttgtaatg
aatgttacggcgttgaataattatttaaaatgccctttagagttttattataaaaatcta
atccgcattccttccggcaaatcagaagcaacagaatttggaagcgccgtgcatcatgcg
ctggaaaagcttttccgaaaaatgcaggaagggaaaaaagataccttccctccaaaggaa
gaattaataatggactttcaatggtatatgcatcggcacagagaaaactttaccaaggaa
gcttttgacagaagaatggaatatggtgatgaagtgctgagtaattattacgataaatat
gtaaacacctggaacaaaattgtaacggtagaacgtaatatcaggaatgtaacaaacggc
gttcctataaaaggtaaattggataaactagaattcaatggaaaagaagtaaatgtagtg
gattataaaaccggcgatattgataaagcaaaacccaagctacaagcgccgaatgataaa
gaacccaatggtggcgattattggcggcaggcagtcttctataagatccttgtagataat
tatgaacaaaaagactggaaagtagtaagtacagaatttgattttatagaaccggacaaa
aagaaagaatatcaaaaggcaaagattgtaattaatccaaatgatattactacggtaacg
cagcagatcgcagaagtatggcagaaaatccaggaaagagatttttataccggatgcgga
aaagaagattgtcattggtgcaattttgtaaaggaaaatcaactcgcagtaaaattgcat
gaactgacagaggaagaggctggagagttttaa
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