Ferruginibacter albus: K9M53_07675
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Entry
K9M53_07675 CDS
T07524
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fei
Ferruginibacter albus
Pathway
fei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K9M53_07675 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fei03021
]
K9M53_07675 (rpoC)
03400 DNA repair and recombination proteins [BR:
fei03400
]
K9M53_07675 (rpoC)
Enzymes [BR:
fei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K9M53_07675 (rpoC)
Transcription machinery [BR:
fei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K9M53_07675 (rpoC)
DNA repair and recombination proteins [BR:
fei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K9M53_07675 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl_2
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
UAY53536
LinkDB
All DBs
Position
1698895..1703187
Genome browser
AA seq
1430 aa
AA seq
DB search
MAFKKENRPRSTFSQITIGLASPDSILEKSFGEVLKPETINYRTYKPERDGLFCERIFGP
VKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIKLVVPVVHIWYFKSLPNKI
GYLLGMSSKKLETIIYYERFVVIQSGIRADKGQNFGDLLTEEEYLDILDTLPKDNQYLPD
EDPNKFIAKMGAEAVHDLLQRIDLDQLSFDLRNAAANETSQQRKADALKRLSVVESFRDA
NTRINNRPEWMVMQYIPVIPPELRPLVPLDGGRFASSDLNDLYRRVIIRNNRLKRLLEIK
APEVILRNEKRMLQEAIDSLFDNSRKSNAVKAEGGRALKSLSDVLKGKQGRFRQNLLGKR
VDYSGRSVIVVGPELKMHECGLPKDMAAELFKPFIIRKLIERGIVKTVKSARKLVDKKEA
VIWDILENILKGHPVMLNRAPTLHRLSIQAFQPKLIEGKAIQLHPLVTTAFNADFDGDQM
AVHVPLSNAAVLEAQMLMLSSHNILNPQNGTPITLPSQDMVLGLYYITKGKKSTPEEPVK
GENKAFYSAEEVIIAYNEKQVDLHAGIRVKVNVRNPNGEIENKLIETTVGRVIFNQHVPK
GAGFVNALLTKKSLREIIGDIIKWTNIPTTAKFLDDIKTLGYRMAFKGGLSFNINDLIIP
AVKQELIDNATVEVEEVWENYNMGLITNNERYNQTVDIWSRVDTRITETLIRELAADKQG
FNSVYMMLDSGARGSKQQIKQLAGIRGLMAKPRKSGSSGSEIIENPILSNFKDGLNVLEY
FISTHGARKGLADTALKTADAGYLTRRLVDVSQDVVINDEDCGTLRGIATSALKDNEDII
EPLSDRIAGRMSLHHVFDPVTEELLISAGEEIDADVAKKIEDAGIETVEIRSVLTCESKR
GVCVKCYGKNLATGYLAQKGDAVGIIAAQSIGEPGTQLTLRTFHVGGVAGSASVESTLPA
KFDGTIQFDGLRTVTAEDNEGKKIQIVIGRTGEVRISDVKNDRLLITNNIPYGATLNVKD
GQKVAKGDVICTWDPFNNVIVSEIVGKVKLDSVIEGVTYREEADEQTGHKEKVIIETKDK
TKIPSITVEGKEHKNYNLPVGSHIVIEDGEDVKNGQVLVKIPRVLSKLKDITGGLPRVTE
LFEARNPGNPAVVCEIDGVVTFGNIKRGNREIIVEAKDGVIKKYLVPLTRQILVQDGDFV
KAGSPLSDGQIAPADILAIKGPFAVQEYVVNEIQEVYRLQGVKINDKHIEVIVRQMMRKV
TIEDAGDTKFLEGDTEDRHDFNAENDYIFDKKVVTESGDSSKLRSGQIVTLRDVREENSI
LRRTDKKLVEFRDASPATSSPLLLGITKASLGTHSWISAASFQETTKVLSSAAINGKTDE
MLGLKENVITGHPIPAGTGLRDFDNMIVGSKEEYELLMTTKEVMSFDEEE
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaaaaaagaaaatcgcccccgttctacgttttcacagattacaataggtttg
gcttcgcctgatagcattttggaaaaaagctttggtgaagtgttgaagcctgaaaccatt
aactatcgtacgtacaagcctgaaagagatggtttgttctgcgaaaggatttttggtccg
gtaaaggattacgaatgtgcttgcggaaagtacaagcgtatccgttacaagggtattgtg
tgcgaccgttgcggtgtggaagtaacagaaaagaaagttcgtcgtgaaagaatgggacac
atcaaactggtggttcctgtagttcacatttggtattttaaatcattacctaacaagatc
ggttatttgttggggatgagctctaaaaaattagaaacaatcatttactacgaacgcttt
gtagttattcaaagcggtattcgtgcagataaaggacaaaacttcggagatcttttaact
gaagaagaatatttggatatcttggacacgttgccaaaagacaaccagtatcttcctgat
gaagatccgaacaagttcattgctaaaatgggagcagaagcggtgcatgatctattgcaa
cgcatcgaccttgaccaattaagctttgatctgcgtaacgctgcagctaacgaaacatct
caacaacgtaaagcagatgcattaaagcgtttgagcgttgtagaaagtttccgtgatgct
aatacaagaatcaacaaccgtcctgaatggatggtaatgcaatacattcctgttattcca
ccggaattgcgtccgttagttcctttggatggcggtcgttttgcatcatctgatctgaac
gatctatatcgtcgtgtgatcatccgtaataatcgtttaaaaagattattagaaattaaa
gctcctgaagtgatcttacgtaatgaaaaacgtatgttacaggaagcgatcgattcattg
tttgacaacagccgtaaatcaaatgctgttaaagcagaaggtggacgtgcgttgaaatca
ttgagcgatgtattgaaaggtaagcaagggcgtttccgtcagaacttattaggtaaacgt
gttgactattccggtcgttcggttatcgtggttggtcctgaattgaaaatgcacgaatgt
ggtttaccaaaagatatggctgcagaattattcaagccatttatcattcgtaaattaatt
gaaagaggtattgtaaaaacagtaaaatcagccagaaaattagttgataaaaaagaagct
gttatttgggatatcctggaaaatatattgaagggtcacccggtaatgttaaaccgtgcc
ccaacacttcaccgtttgtcaatacaggctttccagcctaagttgattgaaggtaaagcg
attcaattacacccgttggtaacaacggcattcaacgcggattttgatggtgaccagatg
gcggttcacgtgcctttgagcaacgctgccgttttggaagcacaaatgttgatgttatca
tctcataacattttgaatcctcagaacggtacgcctatcacacttccttctcaggatatg
gtgttgggattgtactacatcactaaaggaaaaaaatcaactccggaagaacctgtaaaa
ggagaaaacaaagcattctattcagctgaagaagttatcattgcttacaatgaaaagcaa
gttgacttacatgcagggatcagggtgaaagtaaatgttcgtaaccccaacggtgagatt
gagaataaattgatcgaaacaactgttggtcgtgtaatattcaaccagcatgtacctaaa
ggtgcaggtttcgtaaatgcgttgttgaccaaaaaatcgttaagagagattattggtgat
attattaaatggacaaacattccaactactgccaagttcctggatgatattaaaacatta
ggataccgtatggcgttcaaaggcggtttgtcgttcaatattaatgatcttatcattcct
gctgttaagcaagaattaattgataatgccactgtagaggttgaagaagtttgggaaaac
tacaatatggggcttatcaccaataacgaacgttataaccaaacagtagatatctggagc
cgtgtggataccaggatcactgaaacgttgatacgtgaactggcagcagataagcaaggg
ttcaactctgtttatatgatgttggattcaggtgcacgtggtagcaagcaacagattaaa
cagttggctggtatcagggggttgatggctaaaccacgtaaatcaggttcatcaggaagt
gagatcattgaaaacccgatcctttccaactttaaagatggattgaatgtattggaatac
tttatctctacgcatggtgcccgtaaaggtttggcggatacagcgttgaaaacagccgat
gccggttacttgacccgtcgtttggtggacgtttctcaggatgttgttatcaatgatgaa
gattgcggcacattgcgtggtattgcaacttcagcattaaaagataatgaagatattatt
gaaccattgagcgatagaatagcaggtcgtatgtcattgcatcatgtttttgatcctgtg
acggaagaattattaattagcgccggcgaagaaattgacgctgatgttgctaagaaaatt
gaagatgcaggaattgaaaccgttgaaatacgctctgtattgacttgcgaaagcaaacgt
ggtgtgtgtgtgaaatgttatggtaaaaacctggctaccggttatttggcgcagaaaggt
gatgcagtaggtatcattgctgcacaaagtattggtgagcccggtacgcagttaacactt
cgtaccttccacgtgggtggtgtggctggttcggcttcggttgaatctacattgcctgct
aaatttgatggtactatccagtttgatggtttacgtacagtaactgccgaagataatgaa
ggtaaaaaaatacagatcgtaattggtcgtacgggtgaggttcgtatcagtgatgttaag
aacgaccgtttattgatcactaacaatattccttacggtgctaccctgaatgtaaaagat
ggacagaaagttgctaaaggcgatgttatctgtacatgggatccgttcaacaatgtgatc
gtttctgaaattgttggtaaggttaaattagacagcgttatcgaaggtgttacgtatcgt
gaagaagctgatgaacaaacaggtcacaaagaaaaagtgatcatcgaaacaaaagataaa
acaaagataccttctatcactgttgaaggaaaagaacataaaaactataaccttcctgta
ggtagccatatcgttatcgaagatggtgaagatgtgaagaatggtcaggtgttggtgaaa
attcctcgtgtgttaagcaaattgaaggatatcaccggaggtcttcctcgtgtaacagaa
ttgtttgaggcaagaaacccgggtaaccctgctgttgtttgcgaaattgatggtgtggta
acttttggtaacatcaaacgtggtaaccgtgagatcatcgtggaagcaaaagatggtgtt
attaaaaaatacttagttccattgacacgccagatccttgtacaggatggtgactttgta
aaagcaggttcaccattatctgatggacaaattgctccggctgatatattggctattaaa
ggtccgtttgcagtacaagagtacgtagtgaatgagatccaggaagtatatcgtttacaa
ggtgtgaagatcaacgacaagcacattgaagtgatcgttcgccagatgatgcgtaaagta
accattgaagatgcaggcgatactaaattcttagaaggagataccgaagacagacacgac
tttaacgcagagaatgattacatctttgataagaaagtggtaactgaatcaggtgatagc
tctaaattacgttcaggacagattgttactttacgtgatgtacgtgaagaaaactctatc
ttacgcagaacagacaaaaaactggttgagttccgtgatgcaagtcctgctacatcatct
ccattattgttaggtattaccaaagcatcgttaggcacacatagctggatttctgcggca
tcgttccaggaaaccactaaagtgttaagcagtgctgctatcaacggtaaaacggatgaa
atgttaggcttgaaagaaaacgttatcaccggtcacccaataccagcaggtacaggctta
cgtgactttgataacatgatagtaggaagcaaggaagagtatgaattgctgatgactacc
aaggaagtgatgagctttgatgaagaagagtaa
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