Ferruginibacter albus: K9M53_08405
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Entry
K9M53_08405 CDS
T07524
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fei
Ferruginibacter albus
Pathway
fei03030
DNA replication
fei03430
Mismatch repair
fei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K9M53_08405 (dnaE)
03430 Mismatch repair
K9M53_08405 (dnaE)
03440 Homologous recombination
K9M53_08405 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fei03032
]
K9M53_08405 (dnaE)
03400 DNA repair and recombination proteins [BR:
fei03400
]
K9M53_08405 (dnaE)
Enzymes [BR:
fei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K9M53_08405 (dnaE)
DNA replication proteins [BR:
fei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K9M53_08405 (dnaE)
DNA repair and recombination proteins [BR:
fei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K9M53_08405 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol3_alpha_C
HHH_3
OB_MCM10
Motif
Other DBs
NCBI-ProteinID:
UAY50616
LinkDB
All DBs
Position
complement(1901028..1904648)
Genome browser
AA seq
1206 aa
AA seq
DB search
MKFSHLHVHTQFSLLDGAAPIKSLYKKAIADGMPALAISDHGNMFGAFEFVKEAYNHKND
DGTLKIKPIVGCEFYITQDRTRKNFSKEEKDPRHHQILLAKNDVGYKNLVKLTSLGYIEG
MYSKYPRIDKELIHKYHEGLIATTCCLGALVPQTILKKGEAEGENEFKWWLNIFQQDYYV
ELQRHGIPEQDKVNEILLKYAKKYNVKVIASNDSHYVDQKDFNAHDILLCINTGEKQATP
ALREFTDDDVLIKNKRFAFPNDQFYFKTTQEMSTVFDDLPEAIDNTNEIVDKVEILDLKR
DILLPNFVVPANFKSQDDYLESITWSGAKDRYKILTPETEERIKFELEVIRNMGFAGYFL
IVSDFIRAGREIGVFVGPGRGSAAGSVVAYCIGITNIDPIKYNLLFERFLNPERKSMPDI
DTDFDDEGRQKVIDYVVQKYGKNQVAQIITYGTMAAKSSIADVARVMDLPLPESRALSKL
VPERPGIVLKRLLKAPITAKEAKDGEKSLEEKEALIADDIENVKKLREIYNGTDVLSKIL
HEAEVLEGSVRNTGIHAAGIIIAPKDLTELLPVATSKESELWITQIEGSVIEEAGVIKMD
FLGLKTLSILKTALKLIKENHNVDIAIDDIPLDDEKTYQLYQQGDTNGTFQFESAGMQKY
LRELKPDKFDDLIAMNALYRPGPMAYIPDYVDRKHGKKQVVYDLADMEEYLKETYGITVY
QEQVMLLSQKLAGFSKGDADVLRKAMGKKQKAVLDKMKVKFIEGATGKGHPKDILEKVWT
DWEAFAQYAFNKSHSTCYAFVAYQTAYLKSHYPSEYMAAVLNHAGSIDKITFFMEECKRM
GITVLGPDINESQSGFAVNDKGEIRFGFSGLKGVGEAAIDSIIEERGKRGPFTTIYDLVK
RANLRTVNKKSLESLAYSGAFDCYKDIHRAQYFFQVPGDSPGLEKVVKFGNIFQSQASSA
TNTLFGDLQMPEIAAPKLPICEPWPLSVKLDFEKEVTGMYMSGHPLDNFKFEMRHYNITS
LAEYNEFKAAVATHPNPYRAFRVAGLVIDAQHRVTKTGKNFGILTIEDYSDKSEFMLWSE
DYVKYTNYLEKGMIVMVEGAFKQRYNSDQYEFKLSKIHLLETVKPTLTKQIVINIEPQFI
KPEMVDFIENNIRQNPGKSGLRFNLKDIRNDYKVGMYTLEKGFTMNDDMAIFLNNNPDLD
VNVVTA
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcacatcttcacgtacatacgcagttttctttgctggatggggctgctcct
atcaaatccttatataaaaaggctattgcagacggtatgccggcactggccataagcgac
catggtaatatgttcggcgcttttgaatttgtgaaagaagcctataatcacaagaacgat
gatggaacgctgaaaataaaacccattgttggttgcgagttctatattacacaagaccgc
acccgcaaaaatttcagcaaggaagaaaaagatccgcgacaccatcaaatactattggcc
aaaaatgatgttggctataagaacctcgtaaagcttacatcccttggttatatcgaagga
atgtattccaagtatccgcgtatcgataaagagcttattcataagtaccatgaggggtta
atagcaaccacttgttgtcttggcgccttagtgcctcaaactatattaaaaaaaggcgaa
gcagaaggcgagaatgaattcaaatggtggttgaatatatttcagcaggattattacgta
gagttgcaacgccacggtattcctgaacaggataaggtaaacgagatactattaaagtat
gccaaaaagtataatgtaaaagttattgccagcaacgattctcattatgttgatcaaaaa
gattttaatgcgcatgatattttgttgtgcattaatacgggcgaaaaacaagccactcct
gcccttcgtgaatttactgatgatgacgttttaattaaaaacaaacgctttgcatttccc
aacgaccagttttattttaagaccacgcaggaaatgtcaactgtgtttgatgatttaccc
gaagcaattgacaacaccaatgaaattgtagataaggttgaaatactggatctaaaacgt
gatatcctgttgcccaattttgtggtgcctgctaactttaaatcgcaggatgattattta
gaaagcataacatggtcgggtgcaaaagatcgttataaaatattaactcccgagacggaa
gaacgcataaagtttgagctggaagttattcgtaacatggggtttgccgggtacttttta
attgtaagtgatttcattcgtgcaggcagggaaattggtgtgtttgtaggtcccggtcgt
ggttctgcggctggcagtgtggtagcatattgcatcggcattaccaatatcgatcccata
aaatacaatttactttttgaaagattcttaaatcccgaacgtaagtcaatgcccgatatt
gatacggactttgatgatgaaggacgccaaaaggtaattgattacgttgttcagaaatat
ggtaagaaccaggtagcacaaattattacctacggtaccatggctgctaaatcgagcatt
gccgatgttgcccgtgtaatggatctgcctttgccggagagcagggctttatccaaattg
gttcctgaacgtccgggtattgttttaaaaagattattaaaggctcctattactgctaag
gaagcaaaagacggcgagaaatcgttggaagaaaaagaagcattgatagcggatgatatt
gagaatgtaaaaaaactgcgtgagatatataatggcactgacgtactcagcaagatatta
catgaagctgaggtattggaaggttctgttcgcaataccggcatccatgccgcaggtatt
atcattgcaccgaaagacctgacagaactattaccggtagccacttccaaagaatcggaa
ttatggatcacacaaattgaaggcagtgtgatcgaagaggcaggtgtaattaaaatggac
ttcctgggtttaaaaacccttagcattcttaaaactgcattaaagctgataaaggaaaat
cataatgtagatatagcgatcgatgatattccgttggatgatgaaaaaacataccagctc
tatcaacaaggcgataccaatggtacattccagtttgaaagtgctggtatgcaaaagtat
ctgcgtgaattaaagccggataaatttgatgatcttatcgctatgaatgccttgtatcgc
cccggtccgatggcgtatattcctgattatgtagatagaaagcatggcaagaaacaggtt
gtctatgatcttgccgatatggaagaatacctgaaggaaacctacggtattacagtttac
caggaacaggtgatgttgctttcgcaaaagctggcaggctttagtaaaggagatgccgac
gtattgcgtaaggcaatgggtaagaaacaaaaagcggtgctggataaaatgaaagtgaag
ttcattgaaggagctaccggcaaaggacaccctaaagatatcctggaaaaagtatggacg
gactgggaggcatttgcacagtacgcttttaataaatcacattccacctgctatgcattt
gtagcctatcaaacggcttatttaaaatcgcattatccaagtgaatacatggcggcggtt
ttaaaccatgccggcagcattgataagatcaccttctttatggaagagtgcaaacgcatg
ggcattacagtattgggtccggatatcaatgaatcgcaaagcggctttgctgtaaatgat
aaaggcgagatacgctttggcttcagcggattaaaaggcgtaggtgaagctgctattgac
agtattattgaagaaagaggcaaacgtggtcccttcactactatttacgacctggtaaag
cgggcaaaccttagaactgtaaataaaaaatcgctggaaagcttggcgtactccggtgct
tttgattgttataaagacattcatcgggcgcaatacttcttccaggttcccggcgattct
cccggtttggagaaagtcgtaaagtttgggaacatttttcaatcgcaggcatccagtgct
accaatactttatttggcgacctgcaaatgcctgagatcgctgcaccaaaattacctatt
tgcgagccttggccgctatcggtaaaacttgattttgaaaaggaagttacgggcatgtac
atgagcgggcatccgctggataactttaagtttgagatgagacattataatattacctct
ttagcagaatacaacgaatttaaagcagccgtggcaacacatcctaacccttacagggct
tttcgtgtagcaggtctggtaatagatgcccaacaccgggtaaccaaaacaggaaagaat
ttcggcatattgaccattgaagattacagcgataaaagtgagttcatgctatggagcgaa
gattatgtgaaatacacgaactatttggaaaaaggaatgatcgtaatggtggaaggtgct
tttaaacaacgttacaacagtgatcaatatgagtttaagttatcaaaaatccatttactc
gaaacggtaaaacctacccttaccaagcaaatagtgatcaatatagagccgcaattcatt
aaaccggaaatggtggattttatagagaacaatattcgacaaaatcccggcaaatccggc
ttgcgttttaatttaaaagatataagaaacgattacaaagtaggtatgtatacgcttgaa
aaaggctttaccatgaacgatgatatggcgatctttctaaataataaccccgatctggat
gtgaacgtggtaacagcataa
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