Ferruginibacter albus: K9M53_15285
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Entry
K9M53_15285 CDS
T07524
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fei
Ferruginibacter albus
Pathway
fei03030
DNA replication
fei03410
Base excision repair
fei03420
Nucleotide excision repair
fei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K9M53_15285 (polA)
03410 Base excision repair
K9M53_15285 (polA)
03420 Nucleotide excision repair
K9M53_15285 (polA)
03440 Homologous recombination
K9M53_15285 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fei03032
]
K9M53_15285 (polA)
03400 DNA repair and recombination proteins [BR:
fei03400
]
K9M53_15285 (polA)
Enzymes [BR:
fei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K9M53_15285 (polA)
DNA replication proteins [BR:
fei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K9M53_15285 (polA)
DNA repair and recombination proteins [BR:
fei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K9M53_15285 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K9M53_15285 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
WHD_BrxR
HHH
RNase_H_2
DUF3913
Motif
Other DBs
NCBI-ProteinID:
UAY51941
LinkDB
All DBs
Position
3577625..3580459
Genome browser
AA seq
944 aa
AA seq
DB search
MQKKLFLLDAYALVFRAYYALIRSPRITSTGRNTNAQFGFTNTLIDLLNNQKPTHMAVCF
DTHAPTERHTDFADYKANRQETPEDIRSAVPDIKKIIEGFNIPVVAMDGYEADDVIGALA
KQAEKAGYEVYMVTPDKDYGQLVSENIKIYKPPYQGSDFEILGPAEVCAKWDIENVNQVI
DILGLMGDSVDNIPGIPGVGEKTAAKLLKEYHSLEGVLENAAAIKGKLGEKIAAGKDLAI
MSKKLATIITNVPVEFHEEDFCIKEKNIDALKEIFTELEFKTLGKRLLGADFTIVESKSG
ETRPAAAQQIDLFGNIIETATPEPPSQVEEIHPLGGGGATIHNTPHEYFLIDTKHLVSEL
IEKLGKQTEICFDTETTGIDANNAELVGLSFSYQPGEAYYIPCPANQDETKELLKNFEPL
FNNEKITWIGQNIKYDLLMLKWYGIELKGNIFDTMLVHYVVEPDGKRGMDDLSAKYLGYE
PVHIEELIGKKGKTQGNMRDVEIEKIKDYAAEDADITLQLKHILLPELKEKEVEKVFYEV
ENPLVKVLTDMEFEGIKIDEDFLLQYSKELEKEAKKSEESVYALAGVRFNLASPKQLGEV
LFDKLQLDTSAKKTKTGQYQTGEDVLLKLAAKGHQICDDILNFRELTKLKSTYVDALPQM
INRKTGRVHTSYAQAVAVTGRLSSNNPNLQNIPIRTEKGREIRKAFIPRDKDHVLVSADY
SQIELRIVAGISGDVNMSEAFKTGKDIHTATAAKVFNVEEKDVTKEMRYKAKSVNFGIIY
GQGAFGLAENLGISRTEAKEIIDNYKKQFPAIQQYMDNTINFARENGYVETLMGRKRWLR
DINSANFTVRGFAERNAINSPIQGTAADMIKLAMIKIHEEFKKQNFQSKMLLQVHDELVF
DAHKDEVEIIKPVILHCMQTALALPGNIPTDAEVGVGENWLAAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaattatttttactagatgcctatgcgctggtgttcagagcatactatgct
ttaattcggagccctcgcattaccagcacaggacgcaataccaatgcgcaattcggcttt
accaatacgctcatcgatctgttgaataaccaaaagccgacgcacatggcagtatgtttt
gatacacatgcacccactgaacgtcacaccgattttgccgattataaggccaatcgccag
gaaaccccggaagacattcgttcggcagttcctgatataaaaaagataattgaaggattt
aatattcctgttgtagccatggatggctatgaagcagacgatgtgatcggcgcattagct
aaacaggcagaaaaagcaggatatgaagtgtacatggttacccctgataaagattacggg
caattggtttctgaaaatattaaaatatataaaccaccttaccagggcagtgattttgaa
atattaggacctgcagaagtttgcgccaaatgggatatcgaaaatgtaaaccaggtaatt
gatattttaggattgatgggagatagtgttgataatattcccggtataccgggagtggga
gaaaaaacagcagccaagttgttaaaagaatatcactcattggaaggcgtactcgaaaac
gcagctgctataaaaggtaaattgggcgaaaaaattgcagcaggtaaagaccttgccatt
atgagtaaaaagctggcaacaatcattaccaatgttccggttgaatttcatgaagaagat
ttttgtataaaagaaaaaaacattgatgcattaaaagaaattttcactgagctggaattt
aaaaccttaggcaagcgcttgttgggagccgattttactatagtagaatcgaaatcagga
gaaacccgaccggcagccgcacaacaaatagatctattcggaaatattattgagactgct
acacctgagcctccatcacaggtggaagaaatacatccgttaggtggtggcggtgcaact
attcataacactccacacgagtattttttaatcgataccaaacatcttgtttcagaatta
attgaaaagctaggcaagcaaacagaaatttgttttgatacagagaccaccggcatcgat
gcaaacaacgcagaattagtgggcttaagtttttcatatcagcccggcgaagcctattat
attccgtgtcccgctaatcaggatgaaacaaaagaattgcttaaaaactttgagccgctt
ttcaacaatgaaaaaattacctggataggacaaaacataaagtacgatctgttgatgctg
aaatggtatggcatagagctaaaaggaaatatttttgataccatgctggtacattatgtt
gtagaacccgacggcaaacgtggaatggatgatctaagcgcaaaatatctgggttacgaa
ccggtacatattgaagaattgatcggtaaaaaaggaaaaacgcaaggcaatatgcgtgat
gtagagattgaaaaaattaaagactacgcggctgaagatgcagacatcacacttcaatta
aaacatattttattgcctgagttaaaagaaaaagaagtagagaaggttttttatgaagta
gaaaatccattggtgaaagtgctgacagatatggaatttgaaggaattaaaattgatgaa
gattttttgcttcaatattcaaaagagctggaaaaagaagcaaagaaaagtgaagaaagc
gtttatgcgttagcgggagttcgttttaatttggcttctccaaaacaattaggtgaagta
ttgtttgataaattacagctcgacacctcagcaaaaaaaacaaaaacaggacaataccaa
acgggtgaagatgttttattaaagctggctgcaaaaggtcatcaaatctgcgatgatatt
ttaaactttcgtgagcttactaaattaaaatccacttatgtagatgcattaccgcaaatg
atcaatcgcaaaacaggcagagtgcacaccagttatgcgcaggcggttgcagttaccggt
cgtttgagcagcaacaatcctaatttacaaaacattcctattcgtactgaaaaaggaaga
gagatacgcaaagcatttattccaagagataaagatcacgtattggtaagtgccgattac
tcgcaaattgaattacgcattgttgccggtattagcggtgatgtgaacatgagcgaagcc
tttaaaacaggcaaagacattcacactgcaacagcagcaaaggtttttaatgtagaagaa
aaagatgtgaccaaagaaatgcgttacaaagctaaaagcgtgaatttcggaattatttac
ggacaaggcgcttttggtttagccgaaaatttaggcatctcaagaacagaagcaaaagag
atcatcgacaattacaaaaaacaatttcctgctatccagcaatacatggataacaccatc
aactttgcaagagaaaatggatacgttgaaacgctgatggggcgcaaacgctggctacgt
gatattaacagcgccaactttaccgttcgtggttttgcagagcgaaatgccatcaactct
cccatacaaggtactgctgccgatatgatcaagctggcgatgataaaaattcatgaagaa
tttaaaaagcaaaacttccaatcaaaaatgctgttacaagtacatgatgaattggtattt
gatgcacataaagatgaagtagaaataataaagcccgttattctgcattgtatgcaaacg
gcattggcattgcccggcaatattcctactgatgcagaagtgggtgttggcgaaaactgg
ttggcagcacattaa
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