Flavivirga eckloniae: C1H87_05560
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Entry
C1H87_05560 CDS
T05284
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fek
Flavivirga eckloniae
Pathway
fek03030
DNA replication
fek03430
Mismatch repair
fek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1H87_05560
03430 Mismatch repair
C1H87_05560
03440 Homologous recombination
C1H87_05560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fek03032
]
C1H87_05560
03400 DNA repair and recombination proteins [BR:
fek03400
]
C1H87_05560
Enzymes [BR:
fek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1H87_05560
DNA replication proteins [BR:
fek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1H87_05560
DNA repair and recombination proteins [BR:
fek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1H87_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Peptidase_M9
T4_Spackle
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AUP78212
UniProt:
A0A2K9PMC8
LinkDB
All DBs
Position
complement(1351904..1352680)
Genome browser
AA seq
258 aa
AA seq
DB search
MQLNLTRPICFFDLETTGVNISKDRIVEISILKVFPDGKEVNKTWLVNPEMDIPKEVTEI
HGITNEKVANEPTFKELAKEIHNMVKDSDLGGFNSNRFDIPLLAEEMLRADMDFDMKNRL
AVDVQTIFHKMEQRTLSAAYKFYCDKNLDGAHSAEADTNATYEVLKAQIAKYEEIENNTK
FLAEFSSRKKFADFAGFIAYNKDGVECFSFGKHKGKLVTEVLEKEPGYFGWLLNADFPLY
TKKVLTSIKLRSFNNKLE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaactaaatctcacaagacctatttgttttttcgatctagaaacaacaggggtgaac
atatccaaagatcgtattgtagaaatttctatccttaaagtttttcctgatggaaaagaa
gttaataaaacatggttggtaaatccagaaatggacataccaaaagaagttaccgaaatt
catggtattaccaatgagaaagttgcaaacgagccaacgtttaaggaattagccaaagag
attcataatatggttaaagattcggatttaggtggatttaactctaacagatttgatatt
cctctattagcagaagaaatgttgcgtgcagatatggattttgatatgaagaaccgttta
gcagtagatgtacaaactatttttcataaaatggagcaacgtacattaagtgccgcatat
aaattttattgtgataaaaatcttgatggagcacatagtgcagaagcagatactaacgca
acttacgaggtcttaaaagcgcaaattgctaaatatgaagagatagaaaacaatactaag
ttcttggcagagtttagttcgagaaaaaagtttgcagattttgccggttttattgcgtac
aataaagatggagtggaatgtttttctttcggaaaacataaaggaaaactggtaacagag
gtgttagaaaaagaaccaggatattttggatggttgttaaatgctgattttcctttgtat
actaaaaaagtactaacaagcattaaacttagaagttttaataataaattggagtaa
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integrated database retrieval system
