Flavivirga eckloniae: C1H87_07885
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Entry
C1H87_07885 CDS
T05284
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
fek
Flavivirga eckloniae
Pathway
fek00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fek00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C1H87_07885 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fek01007
]
C1H87_07885 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fek03016
]
C1H87_07885 (lysS)
Enzymes [BR:
fek01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
C1H87_07885 (lysS)
Amino acid related enzymes [BR:
fek01007
]
Aminoacyl-tRNA synthetase
Class II (A)
C1H87_07885 (lysS)
Transfer RNA biogenesis [BR:
fek03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C1H87_07885 (lysS)
Prokaryotic type
Other AARSs
C1H87_07885 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AlkZ-rel
PASTA
Motif
Other DBs
NCBI-ProteinID:
AUP78632
UniProt:
A0A2K9PNK7
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All DBs
Position
1897040..1898731
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AA seq
563 aa
AA seq
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MSQLSEQELVRREKLAKLRALGINPYPADLYPVNHTSKQVKDEFEEGKQVIVAGRLMMIK
VQGKASFAQLQDAEGKIQVYFNRDEICPGEDKEKYNEVFKKLIDFGDFIGIEGELFTTKV
GEKTVKVKNFTLLSKALKPLPLPKEKDGVVYDAFTDPEQRYRQRYADLAVNPQVKDVFVK
RTKLFNAMREFFNNSGYFEVETPILQPIPGGAAARPFVTHHNALDIPLYMRIANELYLKR
LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFCERLLEHCAIAVN
GTTKATFGEHDIDFKAPYARVTMADSIKHFTGFDITGKTEDEIRQAAKDLGVEVDETMGK
GKLIDEIFGEKCEGNYIQPTYITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYS
ELNDPIDQRERFEHQLKLAAKGDDEATEFIDHDFLRALEYGMPPTSGMGIGMDRLIMFLT
NNQSIQEVLFFPQMRPEKKAPAISEEGKALLELLKKTERLALNDLKSQSGLSNKKWDKTI
KELTKNSLAKVEKTDDGLFVEMT
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaattatcagagcaagagcttgtaagaagagaaaaattagcaaaattacgtgca
ttgggtattaatccctaccctgcagacttatacccagtaaaccatacctccaaacaggtt
aaagatgaatttgaagaaggcaaacaggttattgttgctggtaggttgatgatgataaaa
gtacaaggaaaagctagttttgctcaattacaagatgctgaaggcaaaatacaggtatat
tttaatcgcgatgaaatttgtccgggagaagacaaagaaaaatacaacgaagtttttaaa
aaacttatagattttggagactttattggtattgaaggcgaactgtttacaacaaaagta
ggtgagaaaacggttaaagttaaaaatttcaccttactaagtaaggctttaaaaccccta
ccattaccaaaggaaaaagatggtgttgtgtatgatgcgtttaccgatccagaacaacgt
tacagacagcgttatgcagatttagcagtaaacccgcaagtaaaagacgtttttgtaaaa
cgcaccaaactgtttaacgccatgcgcgagttttttaataactctggatactttgaagtt
gaaacgcctattttacagccaatacctggtggtgcagctgcacgtccttttgtaacacac
cacaatgctttagatattccgttatacatgcgaattgctaacgagctatacttaaaacgg
ttaattgttggtgggtttgatggggtatacgagttttctaaaaactttagaaacgaaggt
atggacagaactcataaccctgagtttactgccatggaaatctatgtggcctacaaagat
tacaattggatgatggatttttgtgaacgtttattagagcattgtgctatagctgtaaac
ggaaccactaaagctacttttggtgaacacgacatagactttaaagcgccatatgctcgt
gtaactatggcagactctattaagcatttcacaggatttgacattacaggaaaaaccgaa
gatgaaattagacaagctgctaaggatttgggtgttgaagttgatgaaactatgggtaaa
ggcaaacttatcgatgaaatttttggtgaaaaatgtgagggtaattatatacaaccaact
tatataaccgattatcctaaggagatgagtccactttgtaaagagcacagagataatccg
gaattaaccgagcgttttgagctaatggtttgtggtaaagaaattgccaatgcttattct
gagcttaatgatcctattgaccaacgcgaacgttttgaacatcagcttaaattagctgct
aagggtgatgacgaagctacagagtttatcgatcatgactttttacgtgctttagagtat
ggtatgcctccaacatctggtatgggcataggtatggatagattaattatgtttttaacc
aataaccagtcgatacaagaggtattgttcttcccacaaatgcgaccagaaaagaaagct
ccggccataagtgaagaaggaaaagcacttttagagctcctgaagaaaactgagcgttta
gcgcttaacgatcttaaatcgcagtctggcttatcgaataaaaaatgggacaaaactatt
aaagagctaactaaaaatagtttagccaaagttgaaaaaacagatgatggtttatttgtt
gagatgacttaa
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