Flavivirga eckloniae: C1H87_08500
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Entry
C1H87_08500 CDS
T05284
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fek
Flavivirga eckloniae
Brite
KEGG Orthology (KO) [BR:
fek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fek03032
]
C1H87_08500 (topA)
03400 DNA repair and recombination proteins [BR:
fek03400
]
C1H87_08500 (topA)
Enzymes [BR:
fek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C1H87_08500 (topA)
DNA replication proteins [BR:
fek03032
]
Prokaryotic type
DNA Topoisomerases
C1H87_08500 (topA)
DNA repair and recombination proteins [BR:
fek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1H87_08500 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
RP-C
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AUP78735
UniProt:
A0A2K9PNW7
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Position
complement(2072317..2074824)
Genome browser
AA seq
835 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFKVESSFGHISDLPSKELGVNVDGDFKPKYEISKDK
KAVVKKLKDLAKNADLVWLASDEDREGEAIAWHLAEALKLDKEKTKRIVFHEITKAAIQK
AIENPRGIDYDLVDAQQARRVLDRIVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVEKER
EIQGFTPVASYRVDAEFSNEDGQAFKAKLPKNFSTKEEAQEFLEKNSTASFKVSDLEKKP
AKKSPAAPFTTSTLQQEASRKLYFSVSKTMTMAQRLYEAGLITYMRTDSVNLSDEARQGA
QAEIESAYGAKYSKPRNYKGKAKGAQEAHEAIRPTNFATHSVNIDRDQARLYDLIWKRAI
ASQMSEAELERTNVKVSASTHNELFSANGEVITFDGFLKVYLEGTDDEDVEQEGMLPAMK
TNETLLNSYISATERYTRPPARFTEASLVKKLEELGIGRPSTYAPTISTIQNRNYIEKGV
VEGVERSYTQLRLQNGSVSDKRLTEKIGSDKGKLVPTDIGMIVTDFLVNHFETILDYNFT
AKVEENFDEIAEGNEDWTIMMKSFYKNFHPKVEDVKENAERESGERILGTDPKTGKQVSV
RLGRFGPMVQIGTVDDEEKPQFASLSPDQQLNTITYEEAMDLFQLPKSLGTYEGEDIVVN
NGRFGPYVKFGDSFVSLPKGVDPLSVELDDAIVLIKEKQKADAPIYVYKDLPVQKGKGRF
GPFIKWNNMFINVNKKYDWDNLSEEDIVELIETKIQKEIDKVVHNWEEEGVRVEKARWGR
HNVIQGKVKVELAKTVDVSEMTLDEAKAIIEANAPKKKAAKKKAPAKKKAPAKKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaatttagtgatagtagagtcaccagcaaaggcaaaaaccattgaaaaattt
ctaggaaaagactttaaagtagagtcaagtttcggacatatatccgatttaccttccaaa
gaattaggcgttaatgtagatggtgattttaaaccgaaatatgagatatccaaggataaa
aaggcagttgtaaaaaaattaaaggacttagctaaaaatgccgatttggtttggttagca
agtgatgaggatcgagaaggggaagcaattgcttggcacttggctgaagctttaaaatta
gataaggaaaaaacgaaacgaattgtttttcacgaaatcacaaaggcagctattcaaaaa
gcaattgaaaaccccagaggtatcgattacgatttggtagatgcccagcaagcccgtcgt
gtactggatagaatagtaggttatgaactatctcctgtgctttggcgaaaagtaaaagga
ggattatctgcaggtagagtacagtccgtttcggtgagactcattgttgagaaagagaga
gaaattcaagggtttacaccagtagcttcatatagggttgatgctgaattttctaacgaa
gacggacaagcctttaaagcaaaacttccaaagaatttttcaactaaagaagaagcgcaa
gagtttttagaaaagaacagtacggcgagttttaaagtttcagatttagaaaagaaaccc
gcaaaaaaatctccggcggcaccgtttaccacatcaacgttacaacaagaagcatcacgt
aaattatatttttcggtaagtaaaaccatgacgatggcacagcgcctatacgaagcgggt
ttaattacttatatgagaacagatagtgtaaacctatcggatgaagccagacaaggcgcc
caagcagaaattgaaagtgcttatggggcaaagtatagtaaaccgagaaattataaaggt
aaagcaaaaggtgctcaagaagcgcatgaggctatacgacctacaaattttgcaacacat
tcagtaaatatcgatagggatcaagcacgtttatacgatttaatttggaaacgagctata
gcatcgcaaatgagcgaggcagaattagagcgtaccaatgtaaaagttagtgcttctaca
cataatgaacttttctcggccaatggagaggtcattacttttgatggctttttgaaagta
tatttagaaggaacagatgatgaagatgttgagcaagaaggtatgttaccagcaatgaaa
actaacgagacacttcttaatagttatatttcagcaactgaacgttatacacgtccgcct
gcaagatttaccgaagcctcactcgttaagaagttagaagagttgggtattggacgtccg
tcaacatacgcgccaacaatttcaaccatacaaaatagaaattatatagaaaaaggtgta
gttgaaggtgtagaaagaagctatacacaactacgacttcagaatggttcggtaagcgat
aaacgattaaccgaaaaaataggttcagataaaggaaagttagtgccaacagatataggt
atgattgtaaccgactttttggtaaatcattttgaaaccattttggattacaattttaca
gctaaggttgaggagaacttcgatgagatagccgaagggaatgaggattggactataatg
atgaagtcattttataaaaacttccatccgaaagtagaagatgtaaaagaaaatgcagaa
agagaatctggagagcgtattttaggaacagatcctaaaaccggaaagcaggtaagtgtg
cgtttaggtcgatttggacctatggtgcaaattggtactgtagacgatgaagaaaaacca
cagtttgccagtcttagtccagaccaacaattaaataccattacttacgaggaagctatg
gatttattccagcttccaaaaagtttaggaacttacgaaggagaagacattgtagtaaat
aatggacgttttggaccttatgttaaatttggagactcatttgtttcgttgcctaaaggt
gtagatcctttgagtgtcgaacttgatgacgctattgttttaattaaagaaaagcaaaaa
gcagacgctcctatatatgtgtataaagatttaccagtacaaaaaggtaaaggacgtttt
gggccatttattaaatggaacaatatgtttattaatgtaaataagaaatacgattgggat
aacttatctgaagaggatattgttgaattaattgaaacaaaaattcaaaaagaaatagat
aaggttgttcataattgggaagaagaaggagtacgtgttgaaaaagcacgttggggtaga
cataatgttatacaaggaaaggtaaaagtagaactggctaaaacggttgacgtttccgaa
atgactttggatgaggctaaggcaattatagaagctaacgcaccaaagaaaaaagcggct
aagaaaaaagcaccagcgaaaaagaaagcaccagctaaaaagaaataa
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