Flavivirga eckloniae: C1H87_08565
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Entry
C1H87_08565 CDS
T05284
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fek
Flavivirga eckloniae
Pathway
fek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1H87_08565 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fek03019
]
C1H87_08565 (groL)
03110 Chaperones and folding catalysts [BR:
fek03110
]
C1H87_08565 (groL)
03029 Mitochondrial biogenesis [BR:
fek03029
]
C1H87_08565 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fek04147
]
C1H87_08565 (groL)
Enzymes [BR:
fek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C1H87_08565 (groL)
Messenger RNA biogenesis [BR:
fek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C1H87_08565 (groL)
Chaperones and folding catalysts [BR:
fek03110
]
Heat shock proteins
HSP60 / Chaperonin
C1H87_08565 (groL)
Mitochondrial biogenesis [BR:
fek03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C1H87_08565 (groL)
Exosome [BR:
fek04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C1H87_08565 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C1H87_08565 (groL)
Exosomal proteins of breast cancer cells
C1H87_08565 (groL)
Exosomal proteins of colorectal cancer cells
C1H87_08565 (groL)
Exosomal proteins of bladder cancer cells
C1H87_08565 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
AUP78748
UniProt:
A0A2K9PPJ6
LinkDB
All DBs
Position
2085058..2086692
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGAPQVTKDGVSVAKEIE
LEDPHENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVNAITADLDSQSKKVGNSSEKIKQVAAISANNDDTIGELIAKAFDKVGKEGVITVEEA
KGMDTYVDVVEGMQFDRGYLSPYFVTDADKMIADLENPYILLFDKKISNLQEILPILEPV
AQSGRPLLIIAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENADLSMLGTAETVTVDKDNTMIVNGAGIAKDIKARVNQIKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKSVLEKITTENLDEVTGIQIVARAIEAPLRTIVENAGGEGSVVISKVLEGKKDFGYDA
KSEEYVDMLKAGIIDPKKVTRIALENAASVAGMILTTECALIDIKEEAAPAMPPMGGGGM
PGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgtgacggattaaaacgcggtgttgat
gcattagccaatgctgtaaaagtaactttaggtcctaaaggacgtaacgtaattattagt
aaatcttttggagcaccacaagtaactaaggatggtgtatctgtagctaaagaaattgag
ttggaagatccacatgagaacatgggagctcaaatggtaaaagaagttgcttctaaaacc
aacgatttagcaggagacggtacaactaccgctactgttttagcacaagctatcgtaaaa
gaaggtttaaaaaatgttgctgctggcgcaaatcctatggatttaaagcgtggtatcgac
aaagcggttaatgccattactgcagatttagattcgcaatctaaaaaagtgggtaattct
tctgaaaaaataaagcaagttgctgcaatttctgcaaacaatgacgatactattggtgaa
ttaatcgctaaagcatttgataaagttggtaaagaaggtgttattaccgttgaggaagcc
aagggtatggatacttacgtagatgttgttgaaggtatgcaattcgatagaggatactta
tctccttacttcgttacagatgcagacaaaatgattgctgatctagaaaacccatacatc
ttattatttgataaaaagatttcgaacttacaggaaattttaccaatcttagaacctgta
gcacaatctggtcgtcctttattaattattgctgaagatgtagacggacaagctttagct
actctagtagttaacaaattacgtggaggtttaaaaattgctgctgtaaaagcaccaggt
tttggagacagacgtaaagctatgttagaagatattgctatcttaactggtggtactgtt
atttctgaagaaagaggatttactttagagaatgcagacttaagtatgttaggtactgct
gaaacggtaacggtagacaaagacaatacaatgattgttaatggtgctggaattgctaaa
gatattaaagccagagtaaaccaaattaaagctcagatagaaactacaactagcgattac
gataaagaaaaactacaggaacgtttagctaaactagctggtggtgttgctgttctttac
gttggtgctgctagtgaagtggagatgaaagagaaaaaagaccgtgttgatgatgcttta
catgcaaccagagctgccgtagaagaaggtattgttgctggtggtggtgttgccttagta
agagcaaaatcggtattagaaaagatcactactgaaaacttagacgaggttacaggtatt
caaattgtagctcgtgctattgaagcacctttacgtactattgttgaaaatgcaggtgga
gaaggtagcgtagttatctctaaagttttagaaggcaaaaaagattttggttacgatgcc
aagtctgaagaatatgtagatatgcttaaagcaggtattatcgatcctaagaaagtaaca
cgtattgcattagaaaatgctgcctctgttgccggaatgatccttactaccgagtgtgca
ttaatcgatattaaagaagaagcggctccagctatgcctccaatgggtggcggtggtatg
ccaggcatgatgtag
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