Flavivirga eckloniae: C1H87_08650
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Entry
C1H87_08650 CDS
T05284
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
fek
Flavivirga eckloniae
Pathway
fek00550
Peptidoglycan biosynthesis
fek01100
Metabolic pathways
fek01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
fek00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C1H87_08650 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C1H87_08650 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fek01011
]
C1H87_08650 (mrdA)
Enzymes [BR:
fek01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C1H87_08650 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
fek01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
C1H87_08650 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AUP78764
UniProt:
A0A2K9PNY7
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All DBs
Position
2103334..2105262
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AA seq
642 aa
AA seq
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MRQFLLFFSIIFVGFLFLSRLFYLQIYTSNEHDLFEDNAIRKVYDYPKRGFIYDRNGELL
VANQPSYDVMVIPREVEPLDTLEFCSLLKIDKEQFIKTYNRARRYSPRLPSVFLSQLSKE
DYAALQEKMRKFEGFYIQKRSLRHYQRSIGANVLGDIGEVNTSDIKKDPYYKMGDLKGKQ
GIEASYEKILRGVKGIKFIQKDRFNRNIGPYKEGEFDTIPEQGKDITITIDAKLQEYGEL
LMQNKRGGVIAIEPSSGEILAMVAAPTYDPNLLVGRERSKNFIKLRDSISNPLFNRSIQG
VYEPGSPFKLMNALIGLQEGVIIPNETVTCYAGYKYGNRFMKCHCYIGRRNNLITGIQES
CNAYFSTVYRKILDKSGSASTGIDTWSKHAKSFGLGNFLNNDLFVGQKGRIPDRAYYKRV
YPKTFYSTYTISNAIGQGEVATTPIQLANMIAAIANRGHYYTPHIIKSIEDKTLPEKFTK
PKYTSIDKEHFEPVIEGMLQVYKKGTAASLQVKDIEICGKTGTVQNYAIIDSVKTDLTDH
SIFVAFAPKDDPKIAIAVFVENGYWGSRFAGKVASLLIEKHIKGHITRKDLEEWLLKHSL
EDEYAKPYSGEPFKINAQTKLQFVEEPEYKRLKQQLIKLQNP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagacagtttttactattcttttcaataatatttgttggttttttatttttatcaaga
ctcttttaccttcaaatatatacttcaaacgaacatgatttgtttgaagacaatgctatt
agaaaagtatacgattatccgaaaagaggttttatttacgacagaaatggcgaacttttg
gtagccaaccaaccatcttacgatgtcatggtaattcctcgcgaagtagaaccattagat
acgctcgaattttgttcgctattaaaaattgataaagagcaatttataaaaacatataat
agagcaagacgctattctcccagattaccgtctgtttttctatcccaattatcaaaagaa
gattatgctgctttgcaagaaaaaatgcggaagtttgaaggtttttatatccagaaaaga
tcactaagacattaccaaagaagtatcggagctaatgttttgggagatattggagaggta
aataccagcgatataaaaaaagacccctattacaaaatgggtgatttaaaaggtaaacag
ggtattgaggcttcttatgaaaaaattcttcgaggtgtgaagggcattaagtttattcaa
aaagacaggtttaatagaaatattggtccatacaaagaaggtgagttcgacaccattcca
gaacaaggaaaagacattactattaccattgatgctaaactacaggaatatggcgaactc
cttatgcaaaataaacgtggtggcgttatagctatcgaaccatcttcgggagaaatactg
gccatggtggccgccccaacctacgatcctaatcttctagtaggaagagaacgctcaaaa
aatttcatcaagcttagagattccatatcaaatccattatttaacagaagtatacaaggt
gtttacgagcctggctctccttttaaattaatgaacgccttgattggtttacaggaaggc
gttataatacccaacgaaactgttacttgttatgcaggatataaatatggtaatcgtttt
atgaaatgccattgctacattggcaggcgcaataatctaattacaggaatacaggagtct
tgcaacgcctatttttcgactgtttacagaaaaattttagataaaagcggtagtgcttca
acaggtattgatacttggagcaagcatgccaaaagtttcggactgggcaattttttaaac
aacgatttatttgttggacaaaaaggtagaattccagatagagcttattacaaacgcgta
tatccaaaaacgttttattctacatataccatatctaacgctatcggacaaggtgaagtt
gccactacccccattcaattagccaatatgattgctgctattgccaatagaggtcattat
tatacaccacatataattaaatctattgaagataaaactttacctgaaaaattcacaaaa
cctaaatatacaagtattgacaaggagcattttgaacctgttatagaaggtatgctacag
gtttacaaaaaaggaacagctgcctcgttacaagtaaaagacatagagatttgtggaaaa
acaggaactgttcaaaactatgctattatagatagtgtaaaaaccgacctaacagatcat
tccatttttgttgctttcgcaccaaaagatgacccaaaaatagctattgccgtttttgtt
gaaaacggatattggggaagtcgttttgcaggtaaagtagccagtttacttatagaaaaa
cacataaaaggacatattaccagaaaagatttagaagaatggcttttaaagcatagttta
gaagacgaatatgcgaagccctattctggagagccctttaaaataaacgcgcaaactaaa
ttgcaatttgttgaagaaccggaatataaacgacttaaacagcaattaataaaattacaa
aacccataa
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