Flavivirga eckloniae: C1H87_14515
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Entry
C1H87_14515 CDS
T05284
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
fek
Flavivirga eckloniae
Brite
KEGG Orthology (KO) [BR:
fek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fek03400
]
C1H87_14515
DNA repair and recombination proteins [BR:
fek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
C1H87_14515
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
AUP79850
UniProt:
A0A2K9PS04
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All DBs
Position
complement(3516603..3517118)
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AA seq
171 aa
AA seq
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MFLVWFYLYFRIVMTYEYKKIKVPRFSEASGFYTTKKRSKMMSKIRGKNTKPEMIFRKAL
WSKGVRYRVDSKQLPGRPDVSIKKYRLAIFIDGEYWHGYNWDERKAKLKTNRDFWIPKIE
RNIQRDKEVNQQLEDMGYTVFRFWAQEIKTNLKTCINDVMMYLDIERFNIK
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttgtctggttttatttgtattttagaatagttatgacctatgaatacaaaaaa
ataaaagttccaaggttcagcgaagcatcagggttttataccacaaaaaagcgctctaaa
atgatgagcaaaattcgtggtaaaaacaccaagccagaaatgatttttcgtaaagcactt
tggagcaagggcgtacgttatcgggtagacagcaaacaactcccagggagacccgatgta
agcataaaaaaatatagacttgccatttttattgatggcgaatattggcatggttataat
tgggatgaacgaaaagccaaactaaaaacgaatcgcgatttttggattccgaagattgaa
aggaacatacaacgagacaaagaagttaaccaacaattagaagatatgggatataccgta
ttccggttttgggctcaagaaataaaaaccaatttaaaaacctgtatcaatgatgttatg
atgtatttagatattgaacgatttaacatcaagtaa
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