Flavivirga eckloniae: C1H87_16445
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Entry
C1H87_16445 CDS
T05284
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
fek
Flavivirga eckloniae
Brite
KEGG Orthology (KO) [BR:
fek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fek03009
]
C1H87_16445
Enzymes [BR:
fek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
C1H87_16445
Ribosome biogenesis [BR:
fek03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C1H87_16445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AUP81657
UniProt:
A0A2K9PYN3
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All DBs
Position
3971611..3972456
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AA seq
281 aa
AA seq
DB search
MSKERNNKSKGKTSFGGSKKNFKKSFVKGDASFKKNDAQQNKKPSNPNEIRLNKYVANSG
MCSRREADVHIATGLVSVNGKVVTEMGYKVKMGDEVKYDGARIYPEKKAYVLLNKPKGFA
TTTSEGKGRTVMDLVANATASRIKPIGRLGRNSKGLLLFTNDDIIVDKFTNSKNGVPRLF
HIELNKNLKLEDLKKIQAGFKIEDKLIAVEEISYIDGASKKEIGLKIKNTGNTIIRSIFD
YLKYDIESLDCVAIGHLTKKDIPRGSWKHLTEQELNTLKML
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaacgcaataataaaagcaagggaaagacttcgtttggaggttcaaagaaa
aacttcaagaaaagttttgtgaagggagatgcctcttttaaaaaaaatgatgctcagcaa
aataaaaaaccgtctaatccaaacgagattagattaaataaatatgtggctaattccgga
atgtgttcgcgccgggaagccgatgttcatattgccacaggcttagtttctgtaaacggg
aaggtggttaccgaaatgggatataaagttaagatgggggatgaggttaaatacgacggt
gcacgtatttatccggaaaagaaagcctacgtacttcttaacaaacctaaaggttttgct
accacaacaagcgaagggaaaggtagaacggttatggatttggttgctaatgctacagct
tccagaataaaacctataggtcgtttgggtagaaactcaaaaggattattgttatttaca
aatgatgatatcattgtagataagtttacaaactctaaaaatggcgtgcctcgattattt
cacatagaattaaataaaaacttaaagctggaagacttaaaaaagatccaggctggtttt
aaaattgaagacaaactaatagctgtggaagagattagttatatcgatggtgcttcaaaa
aaagaaataggtcttaaaattaaaaatacaggaaacacgattattcgttccatattcgat
tatttaaagtatgacattgaaagtttagactgcgttgctattggtcaccttactaaaaag
gatattcctcgcggatcgtggaaacatcttactgaacaggagctaaatacattaaaaatg
ctttaa
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