Flavivirga eckloniae: C1H87_17525
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Entry
C1H87_17525 CDS
T05284
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
fek
Flavivirga eckloniae
Brite
KEGG Orthology (KO) [BR:
fek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fek03400
]
C1H87_17525
DNA repair and recombination proteins [BR:
fek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
C1H87_17525
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_10
TrwB_AAD_bind
AAA
AAA_16
Zot
AAA_30
ResIII
CbiA
AAA_7
Caudo_TAP
RF-1
SRP54
Motif
Other DBs
NCBI-ProteinID:
AUP80413
UniProt:
A0A2K9PTM6
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Position
complement(4215713..4217260)
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AA seq
515 aa
AA seq
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MDNKEAFFKLITEGNTTKGDFIPIGAAMLNGETVTGAHVKIPLKTMNRHGLIAGATGTGK
TKSLQVLAENLSDKGVPVLLMDIKGDLSGLAQPSPGHPKIDERHEKIGLPFEAKSFPVEI
LTLSEQEGVRLRATVSEFGPVLLSRILDLTETQSGIVAVIFQYCDDNKLPILDLKDFKKI
LQYATQEGKAEFAEAYGRISTASTGAILRKVVELEQQGADLFFGETSFDTQDLLRIDENG
RGYINIIRLTDIQDRPKLFSTFMLSLLAEIYSTFPEQGDSDRPELILFIDEAHLIFNEAS
KALLSQIESIVKLIRSKGVGLYFVTQNPTDVPEAVLGQLGLKVQHALRAFTAKDRKAIKL
TAENYPDSEYYDTTEVLTSLGIGEALVSALDEKGRPTPLAATMMRAPMSRMDILTETELS
TLLSESKLVKKYNKDIDRESAYEILNEKIKQAEAEEAKEKARQEKEALKKAASKKRTSTR
SSSRRSTRMNPIVKVLTSATFIRSVFGILTKVLKK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggataataaggaggcttttttcaaactcataaccgaaggcaatacgactaaaggggat
tttattccaataggtgctgccatgttaaacggtgaaaccgttacgggtgctcatgtaaaa
atacctttaaaaaccatgaatcgtcatggtttaattgccggtgcaaccggaacagggaaa
acaaaatcattacaagttttagcagaaaacttgagcgataaaggtgttcctgtattactt
atggatattaagggagatttaagcggattggcacaaccaagtcctggacacccaaaaatt
gatgaacgtcatgaaaaaatagggcttccgtttgaggctaaaagttttcctgttgaaatt
ttaacactttccgaacaagaaggggtgcgcttaagagcaaccgtaagcgagtttggtccc
gtattgctttctagaatcttagatttaaccgaaacacaatccggaattgtagccgttata
ttccaatactgcgacgacaataaattacctatcctcgatttaaaggattttaaaaaaata
ttacaatacgccacccaagaaggaaaagctgaatttgcagaagcttatggtagaatttca
acagcgtctaccggagctattttgcgaaaagttgttgagttggaacaacaaggcgcagat
ttgttttttggtgaaacatctttcgacactcaagacctgttacgaatagatgagaatggc
cgtggttatatcaacattataagattaaccgatatacaagataggcctaagttgttctct
acatttatgctaagtttattagcagaaatatattcaacatttccagaacaaggtgatagc
gacagacctgaattaattctatttatagacgaagctcatttaatatttaatgaagcatca
aaagcattattgagccaaatagaaagcattgtaaaattaatacgaagtaaaggagtagga
ttatattttgtaacgcaaaacccaacagacgttcctgaagctgttttagggcaactgggt
ttaaaagtacaacacgccttaagagcatttaccgctaaagatagaaaggctataaaatta
accgctgaaaattacccggactctgagtattacgacactacagaagtactaacatcatta
ggtattggggaagctttagtatctgctttagatgaaaaaggtagaccaacaccactggct
gctaccatgatgcgagctcctatgagtagaatggatattttaaccgaaacggaattaagt
acattactttccgaatcaaaactggtaaaaaaatacaataaggacattgatagggaaagt
gcttatgaaatacttaatgaaaaaataaaacaagccgaagccgaagaagctaaagagaaa
gcccgacaagaaaaggaagctcttaaaaaagcggcatccaaaaaacgtacatcgacacgt
tcttccagcagaagaagcaccagaatgaatccaattgttaaagtactcacaagtgctaca
tttataagaagcgtttttggtattttaaccaaagtacttaaaaaatag
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