Flavobacterium endoglycinae: J0383_02560
Help
Entry
J0383_02560 CDS
T08015
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fen
Flavobacterium endoglycinae
Pathway
fen00040
Pentose and glucuronate interconversions
fen01100
Metabolic pathways
fen02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J0383_02560
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J0383_02560
Enzymes [BR:
fen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
J0383_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
QSW89705
LinkDB
All DBs
Position
598599..599711
Genome browser
AA seq
370 aa
AA seq
DB search
MKLNVTISMFALTLALGFTACNTEEIGSAQDSQSAAIETTTPTNSNLTAKIGNCAEVPGW
ASQNGGTTGGGSSAETTVTTYAQLKSAIENTAVKVIKVSGTITITTRLSFQDQTGKTIYG
ANGAKLVSTNQTKDGSGIINIKRCKNIIIRNLIFEGPGAYDTDGWDNAILDECTNVWVDH
CEFRDGVDGNFDIKNKSDYISVTYSKFHYLKPPKAGGSGGSDDHRYSNLIGSSDGATGDR
GKLRITFARCWWAPGCKERMPRVRFGQVHIVNSFFNSTVSNKCVAAGFEANIRVESNVFE
GVKNPIDLMSGYTAVTVTDNVFTSVTGTQAGSGTAFTPPYSIVKLNKTAVKADISANAGA
TLGGNTCGSF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatgtaacaatctcaatgtttgctttaacattggcacttggttttacggca
tgtaatactgaggaaatcggatcagcgcaagattcacaaagcgcagcaattgaaacaaca
actccaacaaacagcaatctgacagctaaaattggaaactgcgctgaagttccgggttgg
gcttcacaaaacggaggtacgaccggaggaggttcttcggctgaaacaacagttactact
tatgcgcagctgaaatcagcgatcgaaaacacagctgtaaaagtgattaaggtttcggga
acaattaccattaccacaagattgtctttccaagatcaaactggaaaaacaatttatggc
gctaatggtgcaaaattggtttctactaaccagactaaagacggttctggaatcattaac
atcaaaagatgtaaaaatatcattattcgaaacttaatttttgaaggtccaggcgcttat
gacactgacggatgggacaatgccattctggatgaatgtacaaacgtttgggttgatcac
tgcgaatttagagatggtgttgacggaaatttcgacatcaagaataaatcagattatatt
tcggttacgtattctaaattccactatttaaaaccaccaaaagcgggaggttctggagga
tcagacgatcacagatattctaacttaataggctcaagtgacggcgctactggcgaccgt
ggtaaattaagaatcacttttgcaagatgctggtgggctccaggttgtaaagaaagaatg
cctagagttcgttttggacaagttcacattgtaaatagctttttcaatagtactgtaagc
aacaaatgtgttgccgcaggttttgaagcgaatattcgtgtagaaagcaacgtttttgaa
ggtgtgaaaaacccaatcgatttaatgagtggttatactgccgttaccgttactgataat
gtatttacaagtgtaacaggcactcaggctggaagcggcacagcattcacgccgccctat
tctatcgtaaaattaaataaaacggctgttaaagctgatatttccgcaaatgcaggagct
actttaggcggtaatacctgtggttctttttaa
DBGET
integrated database retrieval system
