Flavobacterium endoglycinae: J0383_05720
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Entry
J0383_05720 CDS
T08015
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fen
Flavobacterium endoglycinae
Pathway
fen03030
DNA replication
fen03430
Mismatch repair
fen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J0383_05720
03430 Mismatch repair
J0383_05720
03440 Homologous recombination
J0383_05720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fen03032
]
J0383_05720
03400 DNA repair and recombination proteins [BR:
fen03400
]
J0383_05720
Enzymes [BR:
fen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J0383_05720
DNA replication proteins [BR:
fen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J0383_05720
DNA repair and recombination proteins [BR:
fen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J0383_05720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QSW90312
UniProt:
A0ABX7QH22
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All DBs
Position
1349972..1351351
Genome browser
AA seq
459 aa
AA seq
DB search
MKKQEYAIVDIETTGGNASGSRITEIAIIIHDGTNVLDRYETLVNPEQDIPPSIFGLTGI
NNEMVANAPIFDDISEKVLEMLTDRIFVAHNVNFDYSFVHHQLEQAGFKWTARKLCTVRA
ARKIKPGLGSYSLGNLCNSLNISLENRHRAGGDADATALLFSLLLEWDDAGEIDKMIKKT
AQDQRLPPNLPQEDFNNLPDKPGVYYFYNQAKKVIYVGKAVNLKKRVTSHFTGNNINQQR
QHFLRDIHGISFEVCATELMALLLECTEIKKLWPTYNRALKRFEAKYGIYQYEARNGYKY
LAIGKMSKFQTCIHEFNNQHTGIHLLRSLAEQFQIDHRFCKYSRSEEGEFFYNHEIKEWP
DPILHNEQVDNAIDYLLNNRPSFAIIDKGRSSDERSCIWIENGHFYGMGYISRDVAINDS
EEVRSYVTPYKSNQYIEQLIFAYAEKHPGKVFFSKHFAR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcaagaatatgccatagtcgatattgaaaccacaggcggtaatgccagtgga
agccgtattacagaaattgccattattattcatgacggtacaaatgtgctggatcgttac
gaaacacttgtaaatccagagcaggacatccctccttctatttttgggttaacgggaatt
aataacgaaatggttgccaatgcgccaatctttgatgatatttccgaaaaagtactggaa
atgcttactgatcgtatttttgtagcacataatgtcaacttcgattattcatttgtgcat
catcaattggagcaggcaggatttaaatggacagcaagaaagctgtgtacggttcgcgct
gcccgaaaaatcaaacccggattaggttcgtacagtttaggaaatctttgcaattcctta
aatatatcattagaaaacagacaccgtgccggcggagatgccgatgctactgctctatta
ttttctcttctgttagaatgggacgacgctggagaaattgacaaaatgatcaaaaaaaca
gcacaggatcagcgtttgcctccaaatttaccacaagaagattttaataatttacctgac
aagccgggagtgtattatttttataatcaggccaaaaaagtgatttatgttggaaaggca
gttaatttgaagaaacgtgttacctcacattttacaggaaacaatattaatcagcagaga
cagcattttttacgagacattcatggaatttcttttgaagtctgcgcaacagaactcatg
gcgcttcttttagaatgtaccgaaatcaagaagctctggccaacttacaatagagcatta
aaacgttttgaagcgaaatatggaatttatcaatacgaagcccgaaatggttataaatat
ctggcaatcgggaaaatgagcaaatttcagacttgtattcacgaattcaataaccagcat
acaggtattcatttattacgaagtctggcggaacaatttcaaatcgatcatcgtttttgt
aaatattcaagatcagaagaaggcgaatttttctacaatcatgaaataaaagaatggccg
gatccaatacttcataatgaacaagtcgacaatgcgattgattatttattgaacaacaga
cccagctttgccattatagataaaggaagatcttcagatgaacgaagctgtatctggatt
gaaaacggtcatttttatggaatgggatatatttcacgagatgttgccattaacgattct
gaagaagtaagaagttatgtcaccccttataaaagcaatcaatatatcgaacagttaatt
tttgcttacgccgaaaaacatccgggaaaagtatttttcagcaaacattttgcgagataa
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