Flavobacterium endoglycinae: J0383_09395
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Entry
J0383_09395 CDS
T08015
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
fen
Flavobacterium endoglycinae
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fen01002
]
J0383_09395
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fen01011
]
J0383_09395
Peptidases and inhibitors [BR:
fen01002
]
Cysteine peptidases
Family C82
J0383_09395
Peptidoglycan biosynthesis and degradation proteins [BR:
fen01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
J0383_09395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Peptidase_M3_N
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QSW91002
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Position
complement(2159571..2161190)
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AA seq
539 aa
AA seq
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MRNFTFLSVIIAGCFLMFSFSPAANAKKLKNDLTEFENVYKINAFSFGTISVAEINSFYK
KYPKLKVYQKDVEELYKKKDYNLIWHDDKNVSEFGALLYHKVNLLNDQGIKAQMPYKDLI
DDIFNENVSNKLPKSETELLLSNMYVFYASNVYSGVDAQTLKKIGWFLPAKTISYDKILD
SLMADPDRLNKDENLLVDQYYRLQNVLKKYRSFEKKGLWKKIEIDEANYKELKPLDSGKV
VQQIRERLFVVGDLKEDSKSQYYDQEMMDAVLKYKKRYGLKLNYTFTKEQIDQMNEPISN
RIKTIMLNMERCRWIPTELASAREYIMVNIPSFRLVYVKDGKYDLVSDVFVGTRMTETVI
FSGKIDRIVFSPYWYVPASIIKNELKLKMAEDKNYLADHNMEWNGGAVRQKPGPNNSLGL
VKFMFPNPNDIYLHDTPAKSLFDFEKRIFSHGCINVRDAKKLAMEILKDDPDWPVDKINS
AMSGEKETPCILKNKIPIYIGYFTAWVNDDGEIGFYPDVYDRDSSLDKLLYSNDSVSMK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaattttactttcttatctgtaattattgctggttgttttttaatgttttccttt
agcccagctgcaaatgctaaaaagctaaaaaacgatctcactgaatttgaaaatgtgtac
aagataaatgctttttcttttggcacgatcagcgtggctgaaataaacagcttttataaa
aagtatcctaaattgaaagtataccagaaagatgttgaagaattgtataaaaagaaggac
tacaacttgatttggcacgatgataaaaatgtcagcgaatttggggcactattgtatcat
aaagtgaatcttttaaacgatcagggaataaaagcccaaatgccttataaagatttgatt
gatgatatttttaatgaaaacgtatcgaataaacttccaaaatcagagaccgaactttta
ttgtcgaacatgtatgtgttttacgccagtaacgtgtattcaggcgttgatgctcagact
ttaaaaaaaattggctggtttctgcctgccaaaactatttcgtatgacaaaattctagat
tcgcttatggcagatccagatcgattgaataaggacgaaaatctgttggtggatcaatat
tacagacttcagaacgtattaaaaaaatatcgaagttttgagaaaaaaggtctttggaaa
aaaatcgaaattgatgaagcgaattacaaagaattaaaacctttagacagcggaaaagtc
gttcaacagattagggaacgtttatttgtagtgggtgatttaaaagaagattcgaaaagt
caatattatgaccaagaaatgatggatgccgttttgaagtataaaaaacgatatggactg
aaactgaattatacttttacaaaagaacaaatcgatcaaatgaatgaacccatcagcaat
agaattaaaacgattatgctgaatatggaaagatgccgatggattccaacagaacttgcc
agcgctagagaatacataatggtaaatattccttctttcagattggtgtatgtgaaagac
ggaaaatacgatttagtatctgacgtattcgtaggaacacgaatgaccgaaacggttatt
tttagcgggaaaatcgacagaattgtattcagtccttactggtatgtgcctgccagcatt
ataaaaaatgagctgaaacttaaaatggccgaggataaaaattatttggccgatcataat
atggaatggaatggaggtgctgtaagacaaaaaccaggacccaataattcgttaggatta
gttaaattcatgtttcctaatccaaatgatatctatttgcatgatactccagcgaaaagt
ttgtttgactttgaaaaacgtatttttagccatggctgtattaatgtaagagatgccaaa
aagctggcgatggaaatattaaaagacgatccagattggccagttgataaaattaatagc
gcgatgagcggagaaaaagaaacaccttgtattcttaaaaataaaattccaatttacata
ggatattttactgcttgggtaaacgatgacggagaaattggtttttatccagatgtttac
gatcgtgattcaagtttagataaactgctgtattctaatgattctgtaagtatgaaataa
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