Flavobacterium endoglycinae: J0383_12860
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Entry
J0383_12860 CDS
T08015
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
fen
Flavobacterium endoglycinae
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fen03400
]
J0383_12860
DNA repair and recombination proteins [BR:
fen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
J0383_12860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
TPX2_importin
Motif
Other DBs
NCBI-ProteinID:
QSW87187
LinkDB
All DBs
Position
2960978..2961397
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AA seq
139 aa
AA seq
DB search
MDNLTPEQRSRNMQAIKSTATKDEVRLAKALWKLGYRYRKNNKKIFGRPDITFAKYKIAI
FVDSEFFHGKDWETQQLRIKSNRDYWIPKIERNIQRDEEVNAFLISQNWTVLRFWSKDIE
KNLEVCLAKIEGTIMLLSI
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atggataatttgactcccgaacaaaggagcagaaatatgcaggcgattaaaagtactgct
acaaaagatgaagtaaggcttgccaaagctttatggaaattgggttacagatatcgaaaa
aacaataaaaagatatttggacgacctgacattacttttgccaaatataaaattgccatt
tttgtcgatagcgaattttttcatggaaaagattgggaaactcaacaattaagaatcaaa
tcgaatagagactattggatcccgaagattgaaagaaatatacaacgtgacgaagaagtc
aatgcttttcttatttctcaaaattggacagtcttgagattttggagtaaagacatcgaa
aagaatctcgaagtttgtctggcaaaaatcgaaggcacgataatgcttttaagtatttaa
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