Flavobacterium endoglycinae: J0383_13090
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Entry
J0383_13090 CDS
T08015
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fen
Flavobacterium endoglycinae
Pathway
fen03410
Base excision repair
fen03430
Mismatch repair
fen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0383_13090 (recJ)
03430 Mismatch repair
J0383_13090 (recJ)
03440 Homologous recombination
J0383_13090 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fen03400
]
J0383_13090 (recJ)
DNA repair and recombination proteins [BR:
fen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J0383_13090 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J0383_13090 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J0383_13090 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
LsmAD
Motif
Other DBs
NCBI-ProteinID:
QSW87232
UniProt:
A0ABX7Q8G4
LinkDB
All DBs
Position
complement(2996782..2998485)
Genome browser
AA seq
567 aa
AA seq
DB search
MRWTLKPKPSEEKIKHLAQALNVEDFVASLLIQRGIETFEDAKKFFRPSLEHLHDPYLMK
DMDKAVARIEKAIENQENFLVFGDYDVDGTTAVSLVSSYLKSHYPHVATYIPDRYDEGYG
VSYKGIDYADDNGISLIIALDCGIKSIDHVAYAKAKNIDFIVCDHHRPGDILPDAVAVLD
PKREDCSYPYDELCGCGVGFKLIQALGQNRNETVEDLLPYLDLVATAIAADIVPITGENR
VLAYFGLKVINSEPRPGIKALTHQVKKKVLDITDVVFIISPRINAAGRIKHGNHAVELLT
EFDLEQAQQFASEIEQYNADRKDLDKKITKEAFQQILENKEEERFSTVVFQEDWHKGVIG
IVASRLIETYYRPTLVFTKSGDKYAASARSVKGFDVYNALDACSEHLEQFGGHMYAAGMT
LKAENYLLFKEAFEKCVQETILPEMRTPEIEIDAEINFSDITPKLIRILKQFEPFGPQNM
TPVFMTANVKDTGYAKTLGAEDEHLRLYAKQNNSDGIAAIGFGLGKKLNIAQNQNPFQIA
YCIAENEWNGTISTQLMLKDIRTNGRD
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggacattaaaaccaaaaccttctgaagaaaaaatcaaacatttggcacaagct
ttaaatgtagaagattttgtagcatcgctcctgattcagcgtggtattgaaacctttgaa
gatgccaagaagttttttcgtccgtctttagaacatttgcacgatccgtatttaatgaaa
gatatggataaagccgttgcccgaatagaaaaagccatagaaaatcaggaaaactttctg
gtttttggagattatgatgttgacggaacaactgctgtttctctggtttcttcgtattta
aaatcgcattatcctcatgttgccacttatattcccgatcgttatgacgaaggttatggc
gtttcgtacaagggaattgattatgcagatgataacggaatttccttaataattgccctt
gactgcggtattaaatcgatcgatcatgtcgcttacgcaaaagcaaaaaacatcgatttt
attgtctgcgatcaccatagacctggagacattctgccggatgccgtggcagttcttgac
ccaaaaagagaagactgctcctatccttatgatgaattgtgtggctgcggtgtcggtttt
aaattgattcaggccttaggtcaaaatcgaaatgaaacggtagaagatcttcttccatat
cttgatttggttgctactgcaatcgcagccgatattgtacccattacaggagaaaaccgc
gttctagcttacttcggattaaaagtcatcaacagtgaaccaagacctggaattaaagct
ttaacgcatcaggtaaaaaagaaagttctcgatattaccgatgtcgtttttatcatttcc
ccaagaataaatgctgcgggaagaatcaaacatggaaatcatgcggtggaacttttaacc
gaatttgatttagaacaagcccaacagtttgcttcagaaatcgaacaatacaatgccgac
cgaaaagatttagataaaaaaattaccaaagaagcttttcagcagattctagaaaacaaa
gaagaagaacgtttttcaactgttgtttttcaagaagactggcacaaaggcgtaatcgga
attgtagcttcacgattgattgaaacgtattatcgtccaactttagtttttaccaaaagc
ggagacaaatacgccgcttctgcccgatctgtaaaaggttttgatgtttacaatgctctt
gatgcgtgttcagaacatttggaacaatttggaggacatatgtatgcagccggaatgact
ttaaaagccgaaaattatctgctctttaaagaagcttttgagaaatgtgtacaagaaacc
attctgcccgaaatgcgaactccagagatagaaattgatgccgaaatcaatttctctgat
ataactccaaaattaattcgaatcttaaagcaatttgaaccttttggcccgcagaatatg
actccagtttttatgactgcaaacgtaaaagatactggatatgcaaaaacattaggagca
gaagatgaacatttgaggctttatgccaaacaaaacaactctgatggcattgctgctatt
ggctttggtctcggaaaaaaattaaatatagcacaaaatcaaaacccatttcaaattgct
tactgcattgcagaaaacgaatggaatggtacaatttcaacacagcttatgctgaaagac
attagaacaaatggaagagattaa
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