Flavobacterium endoglycinae: J0383_13120
Help
Entry
J0383_13120 CDS
T08015
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
fen
Flavobacterium endoglycinae
Pathway
fen02020
Two-component system
fen02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J0383_13120 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J0383_13120 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fen03021
]
J0383_13120 (rpoN)
Transcription machinery [BR:
fen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J0383_13120 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
Motif
Other DBs
NCBI-ProteinID:
QSW87238
LinkDB
All DBs
Position
complement(3002727..3004187)
Genome browser
AA seq
486 aa
AA seq
DB search
MLKQFLNLKLSQKLSPQQIQLMKLIQLPTQAFEQRLLEEMNENPALEAGKEDEYEADEYA
NEDYDDYDDAESDRIEADDINIDEYLSDDDTPDYKTQVNNYSDDEERETPFAAPISFHQD
LINQLNTFILNDEEREIAEFLVGSIDDMGYIRRSIPDIVDDMAFTQGIYTDEAMVEKMMT
VIHELEPSGVGARDLQECLLLQLKHKTPTEYVDLAIDIIENQFDAFTKKHYDKLLQKYGV
SNEQLKKAIHEIERLNPKPGGSFTGNNKVTENIVPDFAIRIIDGELELTLNGRNAPSLHV
SKDYQEMMQTYKDSRDKSAAQKDAVQFIKQKLDSAKWFIDAIRQRQETLFVTMNAIMHYQ
EEYFLDGDETKLKPMILKDIADMVGLDISTISRVANSKYVETPYGTKLIKEFFSEAMKND
QGEDVSTLEIKKILQNTIEEEDKRKPLPDDQLAEILKEKGYPIARRTIAKYREQLDIPVA
RMRKKI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagcaatttttaaatttaaaattatcccaaaaattatctccacagcaaattcag
ctgatgaagttaattcaattgcctacgcaagcttttgaacaacgtttattagaagaaatg
aacgaaaatccagcacttgaagctggaaaagaagatgaatacgaagctgacgaatatgct
aatgaagactacgacgattatgatgatgcagaatctgatagaatcgaagcagacgatatt
aacattgacgaatacttaagcgacgacgatacgcctgattataaaactcaggtaaacaat
tatagtgacgacgaggaacgcgaaacaccatttgcggctccaattagttttcatcaggat
ttaatcaatcagttgaatacttttattttgaatgatgaagagcgcgaaatcgctgaattc
ttagtaggaagtattgatgacatgggttacatccgcagaagcattccggatattgtagac
gatatggcttttactcagggaatttatactgatgaagcaatggtcgaaaaaatgatgacg
gtaattcatgaactagaaccttcgggagttggtgcacgtgatttgcaggaatgtttattg
cttcagttaaagcacaaaacaccaaccgaatatgttgatttagcgattgacatcattgaa
aatcagtttgatgctttcacgaaaaaacattacgacaaactccttcaaaaatacggcgtt
tcaaacgaacagcttaaaaaagcaattcatgaaattgaaagactaaatccaaaaccgggc
ggttctttcactggaaataataaagtaactgaaaatatagttcccgatttcgccatcaga
attattgacggtgaactggaattaactttaaacggacgtaatgctccttccctgcacgtt
tctaaagactatcaggaaatgatgcagacctataaagattccagagataaatcggcggca
caaaaagatgcggttcagtttatcaaacaaaaactggattcggcaaaatggtttatcgat
gcgattagacagcgtcaggaaactctttttgttactatgaatgcgattatgcattatcag
gaagaatatttcttagacggtgacgaaaccaaactaaaaccaatgatcctaaaagacatt
gccgatatggtaggtttggatatttcaacaatctcacgtgtggccaacagcaaatatgtt
gaaaccccatacggaaccaaactgattaaagaattcttctctgaagctatgaaaaatgat
caaggtgaagatgtttcaactcttgaaatcaaaaagattcttcaaaatactattgaggaa
gaagacaagagaaaaccgcttccagacgatcaattggcagaaatcctaaaagaaaaagga
tatccaattgcgagaagaaccattgctaaataccgtgaacagcttgatattccggtagca
agaatgagaaagaaaatttaa
DBGET
integrated database retrieval system
