Flavobacterium endoglycinae: J0383_13555
Help
Entry
J0383_13555 CDS
T08015
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
fen
Flavobacterium endoglycinae
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fen03400
]
J0383_13555
DNA repair and recombination proteins [BR:
fen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
J0383_13555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
ResIII
TrwB_AAD_bind
AAA_16
Zot
AAA
FtsK_SpoIIIE
AAA_30
P-loop_TraG
AAA_7
SLFN-g3_helicase
AAA_19
CbiA
Adenyl_cycl_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QSW87322
LinkDB
All DBs
Position
complement(3106363..3107880)
Genome browser
AA seq
505 aa
AA seq
DB search
MNKKENFIQDITTGYSAKGATIVLGGAILDGEAVAEAHVQIPLKTLNRHGLIAGATGTGK
TKTIQVFSEQLSNSGIPVLMMDIKGDFSGIAKEGKEEGFITERHAKINVPYHVAAFPVEL
MSLSKQNGVRLRATVSEFGPVLFSRILDLNDTQAGVVAVIFKYCDDKQMPLLDLKDIKKV
INYITEEGKDEITASYGKISTATTGTILRKIIELEQQGGDLFFGELSFETDDLMRIDENG
KGYVNIIRLTDIQDKPKLFSTFMLSLLAEIYQKMPEKGDADQPELVIFIDEAHLIFNEAS
KALLEQIETIVKLIRSKGVGIYFVTQNPMDVPSGVLAQLGLKIQHALRAFTANDRQAIKK
TADNYPTSQYYKTDELLTNLGIGEALVTALNEKGIPTPLVATMMRAPMSRMDILSAEEIE
EINNKSKLVKKYAEEIDRESAFEILNKKIADAAEVAAQKEEQAPAKSSKSEPSTTEVVTK
SVLKVVTSATFIRGVFGVLSKFLKK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaagaaaatttcattcaggacattactactggttattctgctaaaggcgca
acaatagtactgggaggggctattttagatggtgaagcagttgcagaagctcacgtgcag
attcctctgaaaacattaaaccgccacggacttattgcaggtgcaactggaacgggaaaa
accaaaacaattcaggttttttctgaacagttatcaaactcgggaattccggtattaatg
atggatattaaaggagatttcagcggtattgctaaggaaggaaaggaagaaggttttatt
acagagcgacacgctaaaattaatgtaccttatcatgtagcagctttccctgttgaatta
atgtcactatccaaacaaaacggagttcgtttacgtgcaacggtttctgagtttggccct
gttttattttctcgaattctggatttaaacgatacacaggccggagtggttgcggttata
tttaaatactgcgacgacaagcaaatgcctttattggatttaaaagatattaaaaaggta
atcaattatattactgaagaaggtaaagatgaaatcacggctagttatggtaaaatatca
actgctacaactggaacgattttaagaaagattatcgaattggagcagcaaggcggtgat
ttattttttggtgaattatcttttgaaacggatgatttaatgcgaattgacgaaaacgga
aaaggctatgtaaatattattcggctaactgatattcaggacaaacctaaattgttctcg
acgttcatgttaagccttttggctgaaatttatcaaaaaatgcctgagaaaggagatgct
gaccaacctgaactggtaatttttattgatgaagcacaccttatatttaatgaagccagt
aaagcgcttttagaacaaattgaaactattgtaaaattgatccgttctaaaggtgtcgga
atctattttgtaactcaaaatcctatggatgttccaagcggagttttggcgcaattaggt
ttaaaaattcagcatgctttaagagcttttacagcaaatgaccgtcaggcaattaaaaaa
acggcagacaattacccgacttctcaatattataaaacagatgaattattgaccaattta
ggaattggagaagcattggtaacagctctaaatgaaaaaggtattccaacgcctttagta
gcaaccatgatgcgtgctccaatgagccgaatggatattttatctgctgaagaaattgaa
gaaataaacaacaaatcgaaactcgttaagaaatacgctgaagaaattgaccgcgaaagt
gcatttgaaattctaaacaaaaaaattgcagatgccgcagaagtagcagctcagaaggaa
gaacaggcgccagcaaaatcttcaaaatcagaaccaagcactacagaagtagttacaaaa
tcggttctgaaagtagtaacaagtgctacctttataagaggcgtttttggggttttatca
aaatttctaaagaagtaa
DBGET
integrated database retrieval system
