Flavobacterium endoglycinae: J0383_17980
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Entry
J0383_17980 CDS
T08015
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fen
Flavobacterium endoglycinae
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fen03016
]
J0383_17980 (truA)
Enzymes [BR:
fen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
J0383_17980 (truA)
Transfer RNA biogenesis [BR:
fen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J0383_17980 (truA)
Prokaryotic type
J0383_17980 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Gad2
Motif
Other DBs
NCBI-ProteinID:
QSW88144
UniProt:
A0ABX7QAU1
LinkDB
All DBs
Position
complement(4024997..4025731)
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AA seq
244 aa
AA seq
DB search
MRYFIQFAYNGTQYNGWQFQPNAPSVQETLNKALSVLLNSTINVMGAGRTDSGVHASEMY
GHFDFETPLDISVLVHKLNSFLPKDIAVFNIIPVHDDAHCRFDATKRTYEYHINTVKNPF
LEGLSWYVNQKLDVNMMNEAAKILLKHTDFQCFSKVNTDVNTFDCTIFEAYWKQENNKLV
FTISANRFLRNMVRAIVGTLINIGLHKITLADFETIIASKSREKAGFSVPAHGLYLTNIY
YDYL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagatattttattcaatttgcttacaacggaacgcagtacaacggctggcagtttcaa
cctaatgctccttctgttcaggaaactttaaataaagcactttctgttttattaaattca
acgataaatgttatgggagctggaagaactgatagcggagttcacgcttctgaaatgtat
ggccattttgattttgaaactcctttagacatttcggttttggttcacaaactcaattca
tttttaccaaaggatattgctgtttttaatattattccggttcatgatgatgcacattgt
agatttgatgccacaaaaagaacttatgaatatcatattaatactgtaaaaaatccgttt
ttagaaggattgagctggtatgtaaaccaaaaattggatgtcaatatgatgaatgaagcc
gcaaagattttattgaaacataccgattttcagtgtttttcgaaagtaaatacggatgtc
aatacttttgactgcacgatttttgaggcatattggaaacaagaaaataacaaattggtt
tttacgatttcggctaaccgctttttacgaaatatggttcgtgccattgtaggaacactt
attaatataggtttacacaaaatcacgctggcagattttgaaactatcattgccagtaaa
agcagagaaaaagccggattttcggttccggcgcatggtttatatttaaccaatatttat
tacgattatttataa
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