Flavobacterium endoglycinae: J0383_23295
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Entry
J0383_23295 CDS
T08015
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fen
Flavobacterium endoglycinae
Pathway
fen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0383_23295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fen03400
]
J0383_23295
Enzymes [BR:
fen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J0383_23295
DNA repair and recombination proteins [BR:
fen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J0383_23295
Prokaryotic type
J0383_23295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QSW89148
LinkDB
All DBs
Position
complement(5410178..5410843)
Genome browser
AA seq
221 aa
AA seq
DB search
MDVKMHSSWKPVLNEEFQKPYFSELISFVKSEYTTKVCYPKGNQIFSAFDHCHFDDVKVV
IIGQDPYHGPNQANGLCFSVNDGIPFPPSLYNIFKEIETDLGKPMPKTGNLERWADQGVF
LLNATLTVRQSEAGSHQGKGWEKFTDAVIKQISAEKENVVFLLWGGFAQKKAALIDASKH
HILKSGHPSPLSANRGFWFGNKHFSLANDFLKSKGLPQIEW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaaaatgcattcttcatggaaaccagttttaaatgaagaatttcaaaaacca
tatttcagcgaattaatttcatttgtgaaatctgaatatactactaaagtttgttatcca
aaagggaatcagattttttctgcttttgatcattgtcattttgatgatgtaaaagttgtt
attattggacaagatccttatcacggacccaatcaagcaaatggtttgtgtttttctgta
aacgacggaattccatttcctccttctttatataatatttttaaagaaattgaaacggac
ttaggaaaaccaatgccaaaaacgggaaacttggaacgctgggcagatcaaggtgttttt
cttttaaatgctactttaactgttagacaatctgaagctggaagccatcaaggaaaaggt
tgggaaaaatttactgacgctgttattaaacaaatttctgccgaaaaagaaaatgttgtt
ttcttactttggggaggttttgctcaaaagaaagcggctttgattgacgcttcaaaacat
catattttaaaatcaggacatccttcgcctttaagtgctaatcgaggtttttggtttggg
aataaacattttagtctcgccaatgattttttaaaatcaaaaggtttgccgcagattgaa
tggtaa
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