Flavobacterium endoglycinae: J0383_23345
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Entry
J0383_23345 CDS
T08015
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fen
Flavobacterium endoglycinae
Pathway
fen03420
Nucleotide excision repair
fen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J0383_23345
03430 Mismatch repair
J0383_23345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fen03400
]
J0383_23345
Enzymes [BR:
fen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J0383_23345
DNA repair and recombination proteins [BR:
fen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J0383_23345
MMR (mismatch excision repair)
Other MMR factors
J0383_23345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QSW89158
LinkDB
All DBs
Position
complement(5420319..5422655)
Genome browser
AA seq
778 aa
AA seq
DB search
MQKYIDQLNEAQRAPVLKKDGPMIIIAGAGSGKTRVLTIRIAYLMHQGVDAFNILSLTFT
NKAAREMKHRISDIVGASEAKNLWMGTFHSIFARILRAESELLGYPSNFTIYDSQDSARL
ISSIIKEMQLDRDIYKPKQVLGRISSYKNSLITVKAYFNNPELIEADAMSKKPRLGEIYQ
QYVERCFKAGAMDFDDLLLKTNELLTRFPEVLAKYQNRFRYILVDEYQDTNHSQYLIVRA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVVMFRLEQNYRSTRNIVEAANT
VMEHNKTKLDKVVWTANEFGPKIKVHRSLTDAEEGRFVASTIFEQKMQNQLHNGAFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLCYLRLVLNPKDEEALIRVINYP
ARGIGDTTVEKLTIAANHYKRSIWEVMVNIDKIDLKLNAGTKNKLKDFVTMIQSFQVIDQ
NQDAFYVTDHVAKKTGLVQELKKDATPEGMAKIQNIEELLNGIKDFTEGQREIDGARGAL
SEFMEDVALATDLDKDTNDDDRVALMTIHLAKGLEFSHVFVVGMEEDLFPSAMSMSTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLTDSEPSRFIEEIEGQYLEYLTPAESNY
RYKSPIDGDIFGDVDKSKLRLTKPVGGTPPKHITDNSPKPDLNIRKLKPVAGTNPNAIAP
NLFDGKLTIGNVVMHERFGKGEVINLEGVGPDRKAEIKFEVGGIKKLLLRFAKLDVIG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatatattgaccagctcaacgaagcgcagagagcacctgttttaaaaaaagac
gggccaatgattattattgctggtgcaggttcggggaaaacccgtgttttaacaattagg
attgcctatttaatgcatcagggagtcgatgcctttaatattttgtcgcttacgtttacg
aataaagcggcgagggaaatgaaacacaggatttcggatattgtgggagcatctgaagcc
aaaaacctctggatgggaactttccattccatttttgcccgtattcttcgtgcagaatcg
gaacttctaggatatccttccaattttacgatttatgattctcaggattcggctagactg
atttcttctattattaaagaaatgcagctggatcgtgatatttataagccaaaacaagtt
ttaggacgtatttcaagttataaaaacagcttaattactgtaaaagcatatttcaataat
ccagaattgattgaagccgatgctatgtctaaaaagccgagattaggtgaaatctatcag
cagtatgtggaacgctgttttaaagccggcgccatggattttgatgatttgctattgaaa
accaatgaattgctgactcgctttccagaagttttagcaaaatatcaaaaccgctttcga
tatattttggttgatgagtaccaggatacgaatcactctcagtatttgattgttagagct
ttatcagataaatttcaaaatatttgtgtagttggagatgatgcgcagagtatttatgct
ttccgtggagcgaacatcaataatattttgaacttccagaaggattatgaaggtgtggtc
atgttccgtttggagcagaattaccgttcgacgcgaaacattgtggaagctgcgaatacg
gtaatggagcataataaaaccaaactggataaagttgtttggacagcaaatgaatttgga
ccaaaaattaaagtccacagaagtttaacggatgccgaagaaggtcgttttgttgctagc
actattttcgaacagaaaatgcaaaatcaattgcataatggcgcttttgctattttgtac
cgtacaaatgcacaatctcgagcgatggaggatgcgttaagaaaacgtgatattccgtat
agaatttatggtggtttgtctttctatcagcgtaaagaaattaaagacgttttatgttat
ttgcgtttggttttgaatccgaaagatgaagaagctttaattcgtgtcatcaattatcca
gcacgtggaattggtgatacaacggtagaaaaactgactattgctgccaatcattacaaa
cgttcgatttgggaagtaatggtcaatattgataaaatcgacttaaagctgaatgcgggt
acaaaaaacaaattaaaggattttgttacgatgattcagagttttcaagttatcgatcag
aatcaggatgctttttatgttaccgatcatgttgctaagaaaacaggtttggttcaggaa
ttaaagaaagatgctactccagaaggaatggcaaaaattcagaatatcgaagaactttta
aacggtattaaagattttaccgaaggacaaagagaaattgacggagcaagaggtgcgctt
tctgaatttatggaagatgtagctttggcaacagatctggataaagatacaaatgatgat
gatcgtgtggcgttaatgacaattcacctagccaaaggattagagttttctcatgttttt
gtagttggtatggaagaagatttgtttcctagtgcaatgagtatgagtacaagaagtgaa
ttagaagaggaacgtcgtttgttttatgtagcattaactcgtgcagagcatcaagcatat
ttaacttacgctcagtcgcgttaccgctggggaaaattaactgatagtgaaccatctcgt
tttattgaagagattgaaggacaatatttagaatatttaactcctgctgaaagtaattat
cgctacaaatcgccaattgatggagatatttttggtgatgttgataaatcaaaactgaga
ttaacaaaaccagttggaggaacaccgcctaaacacattacagataatagtccgaaaccg
gatctaaatattagaaaactgaaaccagttgctggaactaatccaaatgctattgcacca
aatttgtttgatggcaaattaaccattggaaatgtagttatgcatgaacgttttggaaaa
ggcgaagtgattaatcttgaaggtgttggtcctgatagaaaagcagagattaaatttgaa
gtaggaggaattaagaaattacttttaagatttgctaaactggatgttattggatag
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