Ferrovibrio terrae: FNB15_04625
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Entry
FNB15_04625 CDS
T06089
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fer
Ferrovibrio terrae
Pathway
fer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNB15_04625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fer03021
]
FNB15_04625
03019 Messenger RNA biogenesis [BR:
fer03019
]
FNB15_04625
Transcription machinery [BR:
fer03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FNB15_04625
Messenger RNA biogenesis [BR:
fer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FNB15_04625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
AAA_25
Spore_III_AA
AAA
OB_RNB
S1CSD-TOTE-2
ATPase_2
nSTAND_NTPase5
Fungal_virus_P2_C
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QDO96602
UniProt:
A0A516GYM7
LinkDB
All DBs
Position
complement(964639..966000)
Genome browser
AA seq
453 aa
AA seq
DB search
MNLQELKTKSPTDLLAFAEELQIENASTLRKQDMMFAILKQLADREVEITGEGVLEVLQD
GFGFLRSAQANYLPGPDDIYVSPNQIRRFGLRTGDTIEGTIRAPKDGERYFALLKVNTIN
YEDPEQTRHKVHFDNLTPLYPTERLRMELPQIAEEEAPAAAAAPAVKGSTLKSRSGSSKT
EKIISGGPKRDVSARVIDLISPQGKGQRALIVAPPRTGKTMLLQNIAHAISHNHPEVYLI
VLLIDERPEEVTDMQRTVKGEVISSTFDEPASRHVQVTEMVLEKAKRLVEHKRDVVILLD
SITRLARAYNTVVPSSGKVLTGGVDANALQKPKRFFGAARNIEEGGSLTIIATALIETGS
RMDEVIFEEFKGTGNSEIILDRKLSDKRTFPAIDITKSGTRKEELLVDKGVLAKMWVLRR
ILMPMGGQDAMEFLLDKIKHSKTNADFFDSMNT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcaggaactgaaaaccaaatcccccaccgacctgctggccttcgccgaggag
ctgcagatcgagaacgcatccaccctgcgcaagcaggacatgatgttcgcgatcctcaag
cagctggccgaccgcgaggttgaaatcaccggcgagggcgtgctggaagtgctgcaggac
ggcttcggcttcctgcgctccgcccaggccaattacctgccgggccccgacgacatctat
gtcagccccaaccagatccgccgcttcggcctgcgcactggcgacaccatcgagggcacg
atccgcgcgcccaaggacggcgaacgctacttcgcgctgctcaaggtcaacacgatcaat
tacgaagaccccgagcagacgcgccacaaggtgcatttcgacaatctgacgccgctctat
ccgaccgaacgcctgcgcatggaactgccgcagatcgccgaggaagaggcgccggcggca
gccgcagcgccagccgtgaagggttcgacgctcaagagccgcagcggcagcagcaagacc
gagaagatcatctccggcggtccgaaacgggatgtctctgcccgcgtcatcgacctgatc
tcgccgcagggcaagggccagcgcgcgctgatcgtggcgccgccgcgcaccggcaagacg
atgctgctgcagaatattgcgcatgccatcagtcacaatcatccggaagtctatctgatc
gtcctgctgatcgacgaacgtccggaagaagtcaccgacatgcagcgcaccgtgaagggc
gaggtgatttcctccaccttcgacgagccggcaagccgccatgtgcaggtcaccgaaatg
gtgctggaaaaggccaagcgcctggtcgagcacaagcgcgatgtcgtcatcctgctggat
tcgatcacgcgtctggcccgcgcctacaacaccgtggtgccgtcgtcgggcaaggtgctg
accggtggcgtggacgccaacgcgctgcagaagcccaagcgcttcttcggcgccgcccgc
aatatcgaagagggcggctcgctcaccatcattgccaccgcgctgatcgaaaccggttcg
cgcatggacgaagtgatcttcgaagagttcaagggtaccggtaactcggaaatcatcctc
gaccgcaagctgtcggacaagcgcaccttcccggccatcgacatcaccaagtcgggcacc
cgcaaggaagaactgctggtcgacaagggtgtgctggccaagatgtgggtgctgcgccgc
atcctcatgccgatgggcggccaggacgcgatggagttcctgctcgacaagatcaagcac
agcaagaccaatgcggacttcttcgattcgatgaatacctga
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