Ferrovibrio terrae: FNB15_08145
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Entry
FNB15_08145 CDS
T06089
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fer
Ferrovibrio terrae
Pathway
fer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNB15_08145 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fer03019
]
FNB15_08145 (pnp)
03016 Transfer RNA biogenesis [BR:
fer03016
]
FNB15_08145 (pnp)
Enzymes [BR:
fer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FNB15_08145 (pnp)
Messenger RNA biogenesis [BR:
fer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FNB15_08145 (pnp)
Transfer RNA biogenesis [BR:
fer03016
]
Prokaryotic type
tRNA degradation factors
FNB15_08145 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DIP0205-like_N
Motif
Other DBs
NCBI-ProteinID:
QDO99688
UniProt:
A0A516H7F6
LinkDB
All DBs
Position
1665433..1667577
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AA seq
714 aa
AA seq
DB search
MFNIHKTEVMWGGRKLTIETGKIARQADGAVMVTYGDTIVLCTAVAAKNPKPGVDFFPLT
VNYQEKTFAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFADGFRNETQVVATVLSH
DLENDPDIVALVGASAALTISGIPFMGPIGAARVAYINGEYVLNPTKTQLTEAGNKLDLV
VAGTADAVLMVESEAQQLPEDVMLGAVMFGHKGFQPVIEAIIGLAERAAKDAMPLQARTG
YETAFKKLQDSGIEAELRVAYEEKVKQARYAKVGEVKAKAKALFADGEANPVDVSDAFKH
LEAQVVRFNILDTGLRIDGRDTKTVRPIVSEVGVLPRAHGAALFTRGETQALVVTTLGTG
TDEQIIDALDGEYREAFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAVRPLLPAKE
AFPYTIRVVSEITESNGSSSMATVCGTSLALMDAGVPLTAPVAGIAMGLILEDKRFAVLS
DILGDEDHLGDMDFKVAGTNEGVTALQMDIKIAGITEEIMKVALEQAKHGRVHILAEMAK
AMSQNRAGVKENAPRITTMSVPKDKIREVIGSGGKVIREIVEKTGTKIDIEDDGTIKIAS
SDPAAADAAVQWIKSIVSEPEVGMIYKGKIVKLVDFGAFVNFFGSRDGLVHVSEMAPKRI
NKPSDVVSEGQEVRVKVLGIDERGKVRLSMKVVDQATGEDLSNKPKTDEAEQAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatatccacaagaccgaagtgatgtggggcggccgcaagctcaccatcgagacc
ggcaagattgcccgtcaggccgatggcgccgtgatggtgacctatggcgacaccatcgtg
ctctgcacggcggtcgccgcgaagaacccgaagccgggcgtggactttttcccgctcacc
gtgaattaccaggagaagaccttcgctgcgggcaagatccccggcggcttcttcaagcgt
gaaggccgtccgaccgagaaggagacgctgacctcgcgtctgatcgatcgtccgatccgc
ccgctgttcgccgacggtttccgcaatgagacccaggtcgttgccaccgtgctgtcgcac
gatctggaaaacgatcccgatatcgtcgccctggtcggcgcctctgccgcgctcaccatc
tcgggcattcccttcatgggcccgatcggtgccgcccgtgtcgcctacatcaacggcgaa
tatgtgctgaacccgaccaagacccagctgaccgaagcgggcaacaagctcgacctcgtc
gtcgccggcaccgccgacgccgtgctgatggttgagtcggaagcccagcagctgccggaa
gacgtgatgctcggcgccgtgatgttcggtcacaagggcttccagccggtgatcgaagcc
atcatcggcctggcggaacgcgccgccaaggatgcgatgccgctgcaggcccgcaccggt
tacgagactgccttcaagaagctgcaggattcgggcatcgaagccgagctgcgcgtcgct
tacgaagagaaggtcaagcaggcccgctatgccaaggtcggcgaagtgaaggccaaggcc
aaggcgctgttcgccgatggcgaagccaacccggtcgacgtttccgatgccttcaagcat
ctggaagcccaggtcgtgcgcttcaacatcctcgacaccggcctgcgcatcgacggccgc
gacaccaagaccgtgcgtccgatcgtatcggaagtcggcgtgctgccgcgcgcccacggt
gccgcgctgttcacccgtggcgagacccaggcgctggttgtcaccacgctgggcaccggc
accgatgaacagatcatcgacgcgctggacggcgaataccgcgaagccttcatgctgcac
tacaacttccctccctactcggtcggcgaagccggccgcatgggttcgccgggccgccgc
gaaatcggccatggcaagctggcctggcgtgcggttcgcccgctgctgccggcgaaggaa
gccttcccctacacgatccgcgtcgtctcggagatcaccgagtcgaacggttcctcctcg
atggccaccgtctgcggcacctcgctggcgctgatggatgccggcgtgccgctgaccgct
ccggtcgccggcatcgccatgggcctgatcctggaagacaagcgcttcgccgtgctgtcc
gacatcctgggcgacgaggatcacctcggcgacatggacttcaaggttgcgggcaccaac
gagggcgtcaccgccctgcagatggacatcaagatcgccggcatcaccgaagagatcatg
aaggtggcgctggagcaggccaagcatggccgcgtccatatcctggctgagatggccaag
gcgatgtcgcagaaccgcgctggcgtgaaggaaaacgccccgcgcatcaccacgatgagc
gtgccgaaggacaagatccgtgaagtgatcgggtcgggcggcaaggtgatccgcgagatc
gtcgagaagaccggcaccaagatcgacatcgaggatgatggcacgatcaagatcgcgtcg
agcgatccggccgctgccgacgctgccgtgcagtggatcaagtcgatcgtctcggaaccc
gaggtcggcatgatctacaagggcaagatcgtcaagctggtcgatttcggcgccttcgtg
aacttcttcggcagccgcgacggcctcgtgcacgtttcggaaatggcgcccaagcgcatc
aacaagccgagcgacgtggtgtcggaaggccaggaagtgcgcgtcaaggtgctgggcatc
gacgagcgcggcaaggtccgcctgtccatgaaggtggtcgatcaggccaccggcgaggac
ctgtcgaacaagccgaagaccgacgaggccgagcaggctgaataa
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