Ferrovibrio terrae: FNB15_08700
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Entry
FNB15_08700 CDS
T06089
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fer
Ferrovibrio terrae
Pathway
fer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNB15_08700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fer03019
]
FNB15_08700
Enzymes [BR:
fer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FNB15_08700
Messenger RNA biogenesis [BR:
fer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FNB15_08700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
CMS1
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDO97339
UniProt:
A0A516H0N1
LinkDB
All DBs
Position
complement(1770605..1771450)
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AA seq
281 aa
AA seq
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MPDRENLSLKPGSRCYGLKWYPCRVTNLCRPILSNSQFSSLDLVEPIQRALTAEKHVAPT
PIQAKAIPHLLQGRDLLGQAEAGAGKTVAFTLPILQHLSIDRHPAGPRKVRALILTTSRE
RVQHIQESFRAYGRFVRLSQVTVYEGPGKAAQAQALSRGIDILIGTPGRVVELINAGQLE
LNKLEIMVLDETDRMLELGVTNELRAIFEAAPTERQTIVFATTLPAEIKQLADNLLTDPV
TVLANPPAPRLITTAQSARIRDTEARRRVRDLLPERMASRR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
ctgccggacagggaaaatttgtcactcaagcccggttccaggtgttacggtctcaagtgg
tatccctgccgcgtaactaacctttgcaggccaattttgagcaacagccaattctcttcc
ctcgatcttgttgaacccattcagcgcgccctgacggctgagaagcacgttgcgccaacg
ccgattcaggccaaggccattccgcacctgctccagggccgcgatctgctgggccaggcc
gaagccggcgccggcaaaaccgtggctttcaccctgccgatcctgcagcacctgtcgatc
gaccgtcatccggccggtccgcgcaaggtgcgtgccctgatcctgaccacgtcgcgcgag
cgcgtgcagcacatccaggaaagcttccgcgcctacggccgcttcgtgcggctgtcacag
gtcaccgtttatgaaggcccgggcaaggctgcgcaggcgcaggccctgtcgcgcggcatc
gacatcctgatcggcacgcccggtcgcgtggtcgaactgatcaatgccggccagctggag
ctgaacaagctcgagatcatggtgctggacgagaccgaccgcatgctcgaactgggcgtg
accaacgaactgcgcgccattttcgaggccgcgccgaccgagcgccagaccatcgtgttt
gccaccaccctgccggccgagatcaagcaactggccgacaacctgctgaccgatccggtc
accgtgctggccaatccgccggcgccgcgcctgatcaccacggcccagtcggcccgcatc
cgcgacaccgaagcccgtcgtcgcgtgcgcgacctgctgcccgaacgtatggccagccgt
cgctga
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