Ferrovibrio terrae: FNB15_12680
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Entry
FNB15_12680 CDS
T06089
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
fer
Ferrovibrio terrae
Brite
KEGG Orthology (KO) [BR:
fer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fer03016
]
FNB15_12680
Enzymes [BR:
fer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FNB15_12680
Transfer RNA biogenesis [BR:
fer03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FNB15_12680
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QDO98072
UniProt:
A0A516H2R6
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All DBs
Position
2602256..2602870
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AA seq
204 aa
AA seq
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MTITVYQNDLPAGLDLGPVVAVDTETMGLRTLRDRLCVVQLSSGDGNAHLVQFRSGTGYS
APNLKRLLENPKILKLFHFARFDLAALKQYLGAETTPVYCTRTASKLVRTFTDRHGLKDL
CRDLIGVDISKQEQSSDWGAQDLTEAQQRYAASDVLNLHQLKTVLDSMLAREGRTALAEA
CFGFLPARAALDLAGWPEDDIFAH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcactgtctatcagaacgacctgccggccggcctcgaccttggcccggttgtg
gcagtcgataccgagaccatgggcctgcgcacgctgcgcgaccgcctctgcgtcgttcag
ctttcgtcgggggacggcaacgcccatctggtgcagttccgctccggcaccggttacagc
gcgccgaacctgaagcgcctgctggaaaacccgaaaatcctcaagctgtttcacttcgcc
cgcttcgaccttgcggcgctgaaacagtatctcggtgctgaaaccacgccggtttactgc
acccgcacggcctccaagctggtgcgcaccttcaccgaccgccatggtctgaaggatctg
tgccgcgacctgatcggcgtggacatctccaagcaggagcagtcctctgactggggcgcc
caggacctgaccgaggcgcagcagcgctatgccgcatccgacgtgctgaacctgcatcag
ctcaagacggtgctggacagcatgctggcccgcgaaggccgcaccgcactggccgaggcc
tgtttcggcttcctgccggcacgcgccgcgctcgaccttgccggctggccggaagacgac
attttcgcccattga
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