Ferrovibrio terrae: FNB15_15495
Help
Entry
FNB15_15495 CDS
T06089
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fer
Ferrovibrio terrae
Pathway
fer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FNB15_15495 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fer03021
]
FNB15_15495 (rpoC)
03400 DNA repair and recombination proteins [BR:
fer03400
]
FNB15_15495 (rpoC)
Enzymes [BR:
fer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FNB15_15495 (rpoC)
Transcription machinery [BR:
fer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FNB15_15495 (rpoC)
DNA repair and recombination proteins [BR:
fer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FNB15_15495 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QDO98596
UniProt:
A0A516H4B7
LinkDB
All DBs
Position
3178246..3182568
Genome browser
AA seq
1440 aa
AA seq
DB search
MNELSNVFGQPQNAQAFDQIQISIASPERIRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKYRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSL
PSRIGLMLDMTLKDLERILYFENYVVVEPGLSPLKQFDLLTEEQLFRAQEEYGDDSFVAK
IGAEAIRDLLIALDLEKAREDIRQELAETTSELKPKKLVKRLKLVEAFIDSGNKPEWMVM
TVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYSKLELRGLAATVKMAKKMVEKERPEVWDILEEVIREH
PVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYTTMERPSPLGDVVKIKDMNALLKAWAD
DDVIIYDPKTKVEVPKTAVKAELERIVQGGAIVERTPVFTTIAEIQQALDSKAITLHHRI
KARLNTVDGEGNPIIVRVTTTPGRMLLSEILPRHKNVPFRVINQQLTKKEITNVIDVVYR
HCGQKETVIFCDRMMALGFTRAFKAGISFGKDDMVVPSSKLKHIDDTKKLVGEYEQQYQD
GLITQGEKYNKVVDAWSQCTDRVADEMMKVIQTDIDEVSGQRKPINSIWMMAHSGARGSA
AQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSG
YLTRRLVDVAQDCIITEEDCGTERGLTVREVVEGAEVIATLGERILGRVPSIDVKHPLSG
EVIVPAGHLIEERDVDRIETAGVESMLIRSVLTCDSETGVCGKCYGRDLARGTKVNIGEA
VGVIAAQSIGEPGTQLTMRTFHIGGTAQVAEQSSLEAAYDATIKIANRNLVTDSQGRFVV
MGRNCEVILVDANGRERARHKVPYGARLVADEGGSVKKGQRIADWDPYTRPVITEREGVV
NYRDLVEGVSMREATDESTGISYKVVSDWKQNPKGNELRPRITLRDSKGEILMLVSGAEA
RYYLSADAILSVEDGAQVHAGDVLARIPVEGTKTRDITGGLPRVAELFEARRPKDHAIIA
EIDGRVEFGKDYKAKRRLILKSAEEGVDPVEYLIPKGKQIAVQEGDFVRVGDHLLDGNPA
PHDILKVLGVEALANYLVNEIQEVYRLQGVKINDKHIEVICRQMLQKIEIIDPAETTFLI
GEQVDRSEFEEVNAKTEAEGRKVAKGMPVLLGITKASLQTRSFFSAASFQETTRVLTEAA
VGGKVDKLIGLKENVIVGRLIPVGTGAIMNRMKGLAAQRDRDFADALESELQAAVGDAAE
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacttagcaacgttttcggccagccgcagaacgcccaggctttcgaccagatc
cagatttcgatcgcttcgccggagcgcattcgctcctggtcctacggcgagatcaagaag
cctgagaccatcaactaccgcaccttcaagccggagcgggacggtctgttctgcgcccgc
atctttggtccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagtat
cgcggcgtgatctgcgagaagtgcggcgttgaagtcacgctctccaaggtgcgtcgcgag
cgcatgggccatatcgaactggcctcgccggttgcgcatatctggttcctcaagtcgctg
ccctcgcgcatcggcctgatgctggacatgacgctgaaagatctcgagcgcatcctgtat
ttcgagaactacgtcgtggtggagccgggcctcagcccgctgaagcagttcgacctgctg
acggaagagcagctcttccgcgcccaggaagaatatggcgatgacagcttcgttgccaag
atcggcgcggaagccatccgcgacctgctgatcgcgctcgacctggaaaaggcccgtgaa
gacattcgccaggagctggccgagaccacgtcggaactgaagccgaagaagctggtcaag
cgcctcaagctggtcgaagccttcatcgattccggcaacaagccggaatggatggtcatg
accgtgatcccggtgatcccgcccgagctgcgcccgctggtgccgctggatggcggccgc
ttcgccacgtcggatctgaacgatctgtatcgtcgcgtcatcaaccgtaacaaccgcctg
aagcgcctgatcgagctgcgtgcgccggacatcatcgtccgtaacgaaaagcgcatgctg
caggaagctgtcgacgccctgttcgacaacggccgtcgtggccgcgtcatcaccggcgcc
aacaagcgtccgctgaagtcgctcagcgacatgctgaagggcaagcagggccgtttccgc
cagaacctgctcggcaagcgcgtcgactattctggccgttcggtcatcgtggtcggcccg
gaactgaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaagccg
ttcatctactccaagcttgagctgcgcggcctggccgccaccgtcaagatggcgaagaag
atggtggagaaggagcgtccggaagtctgggacatcctggaagaggtgatccgcgagcac
ccggttctgctgaaccgcgcgccgacgctgcatcgtctgggcatccaggccttcgagccg
accctgatcgaaggcaaggcgatccagctgcatccgctggtttgcgccgccttcaacgcc
gacttcgacggtgaccagatggcggtgcacgtgccgctgtcgctggaagcccagctcgaa
gcccgcgtgctgatgatgtcgaccaacaacatcctcagccccgcgaacggcaagccgatc
atcgtgccgtcgcaggacatcgtgctcggcctgtattacaccaccatggagcgccccagc
ccgcttggcgatgtcgtcaagatcaaggacatgaacgcgctgctgaaggcctgggccgat
gatgacgtgatcatctatgaccccaagaccaaggtggaagtgccgaagacggccgtgaag
gccgagctggagcgcatcgtgcagggtggcgccatcgtcgagcggactccggtcttcacg
acgatcgccgaaatccagcaggcgctggactccaaggcgatcacgctgcatcaccgcatc
aaggcccgcctgaacacggtggacggtgaaggcaatccgatcattgtccgcgtcaccacc
acgccgggccgtatgctgctgagcgagatcctgccgcgtcacaagaacgtgccgttccgc
gtgatcaaccagcagctgaccaagaaggagatcaccaacgtcattgacgtggtgtatcgc
cattgcggtcagaaagagaccgtcatcttctgcgatcgcatgatggcgctcggcttcacc
cgcgccttcaaggccggcatttccttcggcaaggacgacatggtcgtgccgtcgtcgaag
ctgaagcatatcgacgacaccaagaagctggtcggcgagtatgagcagcagtaccaggac
ggtctgatcacccagggcgagaagtacaacaaggtggtcgatgcctggtcgcagtgcacc
gatcgcgtcgccgacgaaatgatgaaggtcattcagaccgacatcgacgaggtcagtggt
cagcgcaagccgatcaactcgatctggatgatggctcactcgggcgcccgcggttcggcc
gcccagatgaagcagctcgccggcatgcgcggcctgatggccaagccgtcgggtgaaatc
atcgagacgccgatcatctcgaacttcaaggaaggcctcaccgtgctcgagtatttcaac
tcgacccacggcgcccgcaagggtctggccgacacggcgctcaagacggcgaattcgggt
tacctgacccgccgtctggtcgacgtggcgcaggactgcatcatcaccgaggaagattgc
ggcaccgagcgcggcctgaccgtgcgtgaggttgtcgaaggcgccgaagtgatcgccacg
ctaggcgagcgcatcctcggccgcgtgccgagcatcgacgtgaagcatccgctgtcgggc
gaagtgatcgtcccggccggccacctgatcgaagaacgcgatgtcgaccgtatcgagacg
gccggcgttgaaagcatgctgatccgctccgtgctgacctgcgacagcgagaccggcgtc
tgcggcaagtgctatggccgcgatctggcccgtggcaccaaggtcaacatcggtgaggct
gtcggcgtgatcgccgcgcagtcgatcggtgagccgggtacccagctgaccatgcgtacc
ttccacatcggcggcaccgcccaggtggcggagcagtcgagcctggaggccgcctatgat
gcgaccatcaagatcgcgaaccgcaacctggtgactgacagccagggccgcttcgtggtc
atgggccgcaactgtgaagtcatcctggtcgatgccaatggtcgcgaacgcgcccgccac
aaggtgccgtacggcgcccgcctggtggccgacgaaggcggcagcgtcaagaagggtcag
cgtatcgctgactgggatccgtacacccgcccggtgatcaccgagcgcgagggcgtcgtg
aactatcgcgacctcgtcgaaggtgtgtcgatgcgcgaagccaccgatgagtcgaccggc
atttcctacaaggtcgtctccgactggaagcagaacccgaagggcaacgagctgcgtccg
cgcatcacgctgcgtgacagcaagggtgaaatcctcatgctcgtcagcggtgccgaggcc
cgctactacctctcggccgacgccattctgtcggttgaggatggtgcgcaggtgcatgcc
ggcgacgtgctggcgcgtatcccggtggaaggcaccaagacgcgcgacatcaccggcggt
ctgccgcgtgttgccgagctcttcgaagcccgtcgcccgaaggaccatgcgatcatcgcg
gaaatcgatggccgcgttgagttcggcaaggattacaaggccaagcgccgcctgatcctg
aagtcggccgaagagggcgtcgatccggtcgaatacctgatcccgaagggcaagcagatt
gccgttcaggaaggcgacttcgtccgcgttggcgaccatctgctcgatggcaacccggcg
ccgcacgacatcctgaaggtgctcggcgtggaagcgctggccaactatctcgtgaacgag
atccaggaggtctatcgtctgcagggcgtgaagatcaacgacaagcacatcgaggtgatt
tgccgccagatgctgcagaagatcgagatcatcgacccggccgagaccaccttcctgatc
ggcgagcaggtcgaccgcagcgagttcgaagaggtgaatgccaagaccgaagccgaaggc
cgcaaagtggccaagggcatgccggtcctgctcggcatcaccaaggcgagcctgcagacc
cggtcgttcttctcggcggcctcgttccaggagaccacccgcgtgctcaccgaagctgcc
gtcggcggcaaggtggacaagctgatcggcctcaaggaaaacgtgatcgtcggtcgcctg
atcccggtcggcaccggcgccatcatgaaccgcatgaagggcctcgccgcccagcgcgat
cgcgatttcgccgatgcgctggaaagcgaactgcaggctgccgtcggcgacgccgccgaa
taa
DBGET
integrated database retrieval system
