Ferrovibrio terrae: FNB15_17335
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Entry
FNB15_17335 CDS
T06089
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fer
Ferrovibrio terrae
Pathway
fer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FNB15_17335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fer03021
]
FNB15_17335
03400 DNA repair and recombination proteins [BR:
fer03400
]
FNB15_17335
Enzymes [BR:
fer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FNB15_17335
Transcription machinery [BR:
fer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FNB15_17335
DNA repair and recombination proteins [BR:
fer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FNB15_17335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RepD-like_N
RNA_pol_L_2
IDH
DUF4249
Motif
Other DBs
NCBI-ProteinID:
QDO98924
UniProt:
A0A516H547
LinkDB
All DBs
Position
complement(3553869..3554885)
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWTDLIKPNKLVIEPGAVPGRTATIVAEPLERGFGLTLGNALRRVLLSSLQGAAVT
SIKIDGVLHEFSSIPGVREDVTDIVLNIKSMALKMHGEGPKRMHLNAQGPVEVTAKMIET
GHDIEVMDPNHVLCTLDAGASIRMELTVETGKGYVPASANRPEDAPIGLIPVDALYSPVR
KVSYKVENTREGQILDYDKLTMQMETNGAIKPDDALAYAARILQDQLQLFINFEEPKAES
REKIASEPEFNPNLLRRVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLAQMGLHLGMHVPNWPPENIEELAKKLQDQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatccagaagaattggaccgatctgattaagccgaacaagctggtaattgagccgggc
gctgtgccgggccggactgccactattgttgccgaaccgctggagcgtggttttggtctg
acgctgggcaacgcgctgcgtcgcgtgctgctgtcgtcgctgcagggcgctgccgtcacg
tcgatcaagatcgacggcgtgctgcatgaattctcgtccattccgggcgtgcgtgaagac
gtcaccgacatcgtgctgaacatcaagtcgatggcactgaagatgcacggcgaaggcccg
aagcgcatgcatctgaatgcgcagggtccggtcgaagtgaccgccaagatgatcgagacc
ggccatgacatcgaagtcatggatccgaatcacgtgctctgcaccctggacgccggcgcc
agcatccgcatggagctgaccgtcgagaccggcaagggctacgtgccggcttcggccaat
cgtcctgaagatgcgccgatcggcctgatcccggtcgatgcgctgtacagcccggtgcgc
aaggtctcctacaaggtcgagaacacccgcgagggccagattctcgactatgacaagctg
accatgcagatggagaccaatggcgcgatcaagccggatgacgcgctggcttatgccgcc
cgcatcctgcaggaccagctgcagctcttcatcaacttcgaagagccgaaggcggaaagc
cgtgagaagattgccagcgagccggagttcaatccgaacctgctgcgccgcgtcgacgag
ctcgagctctcggtgcgttcggccaactgcctgaagaacgacaacatcgtctacatcggt
gatctgatccagaagaccgaagcagagatgctgcgcacgccgaatttcggccgcaagtcg
ctcaatgagatcaaggaagttctggctcagatgggtctgcatctcggtatgcatgtcccc
aactggccgccggagaatatcgaggaactggcgaagaagctgcaggatcagtactga
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