Ferrovibrio terrae: FNB15_17635
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Entry
FNB15_17635 CDS
T06089
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fer
Ferrovibrio terrae
Pathway
fer03030
DNA replication
fer03430
Mismatch repair
fer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNB15_17635 (dnaE)
03430 Mismatch repair
FNB15_17635 (dnaE)
03440 Homologous recombination
FNB15_17635 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fer03032
]
FNB15_17635 (dnaE)
03400 DNA repair and recombination proteins [BR:
fer03400
]
FNB15_17635 (dnaE)
Enzymes [BR:
fer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNB15_17635 (dnaE)
DNA replication proteins [BR:
fer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNB15_17635 (dnaE)
DNA repair and recombination proteins [BR:
fer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNB15_17635 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QDO98980
UniProt:
A0A516H5M6
LinkDB
All DBs
Position
complement(3603982..3607449)
Genome browser
AA seq
1155 aa
AA seq
DB search
MSHADFVHLRVHTAYSLTEGAIRVGKLGDLCQRYRMPAVAITDTNNLFGALEFSKEMAGK
GIQPILGCQLSLARADLAQPSARNLKKPDPDKVVLLAQTEAGYANLMKLSTKAYLEPPPG
EVAQIQWADLEACAEGVICLTGGPSGPIARLVLDGQIDAAREQLKTLAGIFPGRTYVELQ
RHGWASEAKSEPGLLDLAYELNLPLVATNDCYFPDEDMYVAHDALLCIAEGSYVGEQNRR
RVTPDHRFKSAEEMRVLFADLPEAIDNTLVIARRCAVKANERAPILPNFGDGTGESEADM
LRRMAREGLELRLQQIGVTDPEKAKVYHDRLDFECDTIIGMKFPGYFLIVADFIQWSKRN
GIAVGPGRGSGAGSVVAWALTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEV
IHYVQDKYGSANVAQIITFGKLQARAALRDVGRVLQLPLGQVDRICKLIPNNPANPVTLA
QAIKEEVRLREERDRDENVARMMDVALKLEGLYRNASTHAAGVVIGDRPLVELVPLYRDP
HASMPATQFSMKYAEAAGLVKFDFLGLKTLDVLEKAINLIRLRGVNIELAEIPLSDQPTF
NLLGRGDAVGVFQFEGSGMRDMLRNMKPDAFEDLIALVALYRPGPMENIPSYIARKHGKE
KPDYLHDWLKPVLEETYGVIIYQEQVMEIAKVLAGYSLGDADLLRRAMGKKIKAEMDAQK
DRFVNGAKAKGVDPERAAFIFELVEKFAGYGFNKSHAAAYALVAWHTAYLKANYPVEFIA
GSMTLDISNTDKLNVFRQECARQGITLLPPDINKSLVEFSVEYDRHEKGAIRYALSAVRN
VGAAPMAVIVAEREKNGPFKSLFDFASRVDPAALNKRMLENLAKAGAFDHLEKNRARVIA
GLETLIRFAQSKAEERNSNQVNLFGGGKTEERLPKLPEGDIWTPMDQLAKEFEAIGFYLS
AHPLDAYQATLNRVGVKRYTEALKMIGASESIVKLAGTVISKQERTSQKTGNRFAFVQCS
DASGMYEVMLFSEILAQHRDMLEAGTNVVWTLSARADGEQPRLSAQKIEKLDDVAARAAA
GIKILIEDDRPLAQIRTLLDKAGKGRGQVMLGLQIDEAGKPDIEADIKLKETFAINPATR
HQIRVLPGVREVYDI
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgccgatttcgtccatctccgggttcataccgcctattcgctgaccgagggc
gcgatccgggtcggtaagctgggcgacctttgccagcggtaccgcatgccggcggtggcg
atcaccgacaccaacaacctgttcggcgccctggaattctccaaggagatggccggcaag
ggcatccagccgatcctcggctgccagctcagcctggcccgtgccgacctggctcagccc
agcgcccgcaacctgaaaaagccggacccggacaaggtcgtgctgctggcccagaccgag
gccggctacgccaacctgatgaagctctcaaccaaggcctatctggagccgccgccgggc
gaggtggcccagatccagtgggccgacctggaagcctgcgccgagggcgtgatctgcctg
acaggaggtcccagcggaccaatcgcccggctggtgctggacggccagatcgacgccgcc
cgcgagcagctcaagactttggccggtatcttccccggccggacctatgtggagctgcag
cgccatggctgggcctcggaagccaagagcgagcccggcctgctcgacctggcctatgag
ctcaacctgccgctggtcgccaccaacgactgctacttccccgacgaggacatgtatgtg
gcgcatgacgcgctgctctgcatcgccgagggctcttacgtgggcgagcagaaccgtcgc
cgcgtcacccccgaccaccgcttcaagtcggccgaggaaatgcgggtgctgttcgccgac
ctgcccgaggcgatcgacaacacgctggtgatcgcccgccgctgcgccgtgaaggccaat
gagcgcgcgccgattttgcccaattttggcgacggcaccggcgagagcgaggccgacatg
ctgcgccggatggcgcgcgagggcctggaactgcgcttgcagcagatcggcgtcaccgac
ccggaaaaggccaaggtctaccacgaccgtctcgatttcgaatgcgacacgatcatcggg
atgaaattccccggctacttcctgatcgtggccgatttcatccagtggtccaagcgcaac
gggattgccgtgggtccgggccgcggttcgggtgccggttcggtggtcgcctgggcgctg
accattaccgatctcgatccgctgcgcttcggcctgctgttcgaacgtttcctaaatccg
gaacgcgtgtcgatgcccgacttcgatatcgacttctgccaggaacgccgcgaagaggtg
atccattatgtgcaggacaaatacggctccgccaacgtcgcccagatcatcaccttcggc
aaactgcaggcccgcgctgccctgcgagatgtgggccgcgtccttcagctgccgctcggg
caggtggaccgcatctgcaagctgatcccgaacaacccggcgaatccggtgacgctggcg
caggcgatcaaggaagaggtgcgtctgcgcgaggaacgcgaccgcgacgagaatgttgcc
cgcatgatggacgtggcgctgaaactggaaggtctctaccgcaacgcctcgacgcatgcc
gccggcgtggtgatcggcgaccggccgctggtcgaactggtgccgctctatcgcgatccg
catgccagcatgccggccacgcagttctcgatgaaatacgccgaggccgccggcctggtg
aaattcgacttcctcggcctcaagaccctcgacgtgctggaaaaggccatcaacctgatc
cggctcaggggcgtgaacatcgaactggcggaaattcccctgtcggaccagccgaccttc
aacctgctcggacgcggcgatgcggtcggcgtgttccagtttgaaggcagcggcatgcgc
gacatgttgcgcaacatgaagcccgacgccttcgaggatctcatcgcgctcgtggcgttg
tatcgcccgggtccgatggaaaatatcccgagctacatcgcgcgtaagcatggcaaggaa
aagcccgactacctgcatgactggctcaagccggtgctggaggaaacctacggcgtcatc
atctaccaggaacaggtgatggaaatcgccaaggtgctggccggctattcgctgggcgat
gccgatctgctgcgccgtgccatgggcaagaagatcaaggcggagatggacgcgcagaag
gaccgcttcgtcaacggcgccaaagccaagggcgtcgatccggagcgggccgccttcatc
ttcgaactggtcgagaaattcgccggctacggtttcaacaagagccacgcggcggcctat
gcgctggtcgcctggcataccgcctacctgaaggccaattacccggtcgagttcattgcc
ggttcgatgacgctggatatttccaacaccgacaagctgaatgtcttccgccaggaatgc
gcgcgacagggcatcacgctgctgccgccggatatcaacaagtcgctggtcgaattctcg
gtcgaatacgacaggcacgagaaaggcgcgatccgctatgcgctttcggctgtgcgcaat
gtcggcgccgcgccgatggcggtgatcgtggccgagcgcgagaagaatggcccgttcaag
tcgctgttcgacttcgccagccgtgtcgatcccgccgcgctgaacaagcgcatgctggaa
aatctggccaaggccggcgcttttgatcatctggaaaagaaccgcgccagggtgatcgca
ggactcgaaaccctgatccgctttgcccagagcaaggccgaggaacgcaattccaaccag
gtgaacctgttcggcggcggcaagaccgaagagcgcctgcccaagctgcccgagggcgac
atctggacgccgatggaccagctcgccaaggaattcgaggcgatcggcttttatctgtcg
gcgcatccgctcgatgcctatcaggccacgctcaaccgcgtcggcgtgaagcgctacacc
gaggcgctgaaaatgatcggcgccagcgaaagcatcgtgaagctggccggcaccgtgatc
tccaagcaggagcgtacctcgcagaagaccgggaaccgttttgccttcgtgcagtgttcg
gacgcctcgggcatgtacgaggtgatgttgttctccgaaatcctcgcgcagcaccgcgac
atgctggaagccggcaccaatgtggtctggactctgtcggcgcgtgccgatggcgagcag
ccgcggctcagcgcgcagaagatcgagaagctggatgacgtggcggcgcgcgccgccgcc
gggatcaagatcctgatcgaggacgaccgcccgctggcgcagattcgcaccctgctcgac
aaggccggcaagggcaggggacaggtgatgctcggtctgcagatcgacgaggccggcaag
cccgacatcgaagccgatatcaagctgaaggaaaccttcgccatcaacccggcaacgcgc
caccagatccgcgtgctgcccggcgtgcgcgaggtttatgacatctag
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