Ferrovibrio terrae: FNB15_18460
Help
Entry
FNB15_18460 CDS
T06089
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fer
Ferrovibrio terrae
Pathway
fer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNB15_18460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fer03019
]
FNB15_18460
03009 Ribosome biogenesis [BR:
fer03009
]
FNB15_18460
Enzymes [BR:
fer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FNB15_18460
Messenger RNA biogenesis [BR:
fer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FNB15_18460
Ribosome biogenesis [BR:
fer03009
]
Prokaryotic type
rRNA helicases
FNB15_18460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDO99132
UniProt:
A0A516H5V6
LinkDB
All DBs
Position
complement(3772963..3774876)
Genome browser
AA seq
637 aa
AA seq
DB search
MTESVGAAFAGAVSPLAAALTARGYTTLTPVQAAVLAPEHAEADLLVSAQTGSGKTVAFG
LNIAPTLLQGSDGFEPFRPGSWMPPLALIIAPTRELALQVCRELAWLYEQTNARVVSCVG
GMDMRAERQALNAGAHIVVGTPGRLKDHIERGALDIGSLRAVVLDEADEMLDLGFREDLE
FILDASPSERRTLMFSATVAKPIAQLATRFQKNAIRIATASATERHGDIAYRALMVAPNE
RENAIINVLRFHDAKSAIIFCGTRMAVTHLTARLSNRGFTVVALSGELSQNERTHALQAM
RDGRAQVCVATDVAARGIDLPGLELVVHADLPTNSETLLHRSGRTGRAGNKGLCVLLVPH
NRRRGMQRLLGERNIDATWGQPPSATEIQAADRKRILNDETLQGELTAEEQTFAAQLIEQ
HGAERIAAAFLRLQQKNRPAPEELLDVAAENDRGPEQSNYGRKTPRDGLASDGPGRGRLG
GSWFKINAGHKQNAEPRWLLPLICRVGHVTRNDVGSIKIFHTESLFEIAAPAAERFIQTV
EREGTGEKKISITRADGPPPETASPQREKKAWIPEHEFRQQRAASGGKPGEGKPRDFKPG
GKPPWKKKERSEGGEFQPDRAPATNKSGWSKPKKKQP
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgactgagtctgttggcgccgcctttgccggtgccgtttcgccgttggccgcggcgctc
accgcgcgcggctataccaccctgacccctgtgcaggccgccgtgctggcgccggaacat
gccgaggccgatcttctcgtctcggcgcagaccggttcgggcaagaccgtcgcctttggc
ctcaatatcgcaccgacgctgctgcagggatcggacggcttcgagccgttccgtccgggc
agctggatgccgccgctggcgctgatcatcgcgccgacgcgcgaactcgcgctgcaggtc
tgccgcgaactggcctggctgtatgaacagaccaatgcccgcgtcgtctcctgtgtcggc
ggcatggacatgcgagccgagcgccaggcgctgaatgccggcgcgcatatcgtggtcggc
acgcctggccgcctgaaggatcatatcgaacgcggcgcgctggatatcggttccttgcgc
gctgtcgtgctcgacgaagccgacgagatgctcgatctcggtttccgcgaggaccttgag
ttcatcctcgatgcctcgccgtccgagcgccgcacgctgatgttttcggccaccgtggcc
aagccgatcgcgcaactggccacgcggttccagaagaatgcgatccgcatcgctaccgcg
agtgcgaccgagcgccatggcgacatcgcctatcgcgcgctgatggtggcgccgaacgag
cgcgagaatgccatcatcaacgtgctgcgtttccatgacgccaaaagcgccattatcttc
tgcggcacgcgtatggcggtgacacacctgaccgcgcgcctctcaaatcgtgggtttaca
gtcgtcgcattgtcgggcgagctgagccagaacgagcgcacgcatgccctgcaggcgatg
cgtgacggtcgggcccaggtctgcgtcgccaccgacgtggcggcacgcggcatcgatctg
cccggtctggaactggtggtgcatgccgacctgccgaccaacagtgagacactgcttcac
aggtcaggtcgtactggcagagcgggcaacaagggcctctgcgtgctgctggtgccgcat
aaccgccggcgcggcatgcagcgtttgctgggcgagcggaatatcgacgccacctggggc
cagccgccgtcggccacggaaatccaggccgccgatcgcaagcgcatcctgaacgacgag
acgctgcagggcgaactgaccgctgaagagcagacatttgccgcccagctgatcgaacag
catggcgccgagcggattgccgccgccttcctgcgcctgcagcagaaaaaccgtcctgcg
ccggaagagctgctggatgtcgccgccgagaatgaccgggggccggaacagtcgaattac
ggccggaagacgccgcgcgacggccttgcctcggacggcccgggcaggggcaggttgggc
ggcagctggttcaagatcaatgccggccacaagcagaatgccgaaccgcgctggctgctg
ccgctgatttgccgcgtcggccatgtcacgcgcaacgatgtcggatcgatcaagatcttc
cataccgaaagcctgttcgagatcgcggcccccgcagccgaacgcttcattcagacggtg
gagcgcgaaggcaccggcgagaagaagatcagcatcacgcgcgccgatggcccgccgccg
gaaaccgcctcgccgcagcgcgaaaagaaggcctggattccggaacacgaattccgccag
caacgcgcggccagcggcggtaaacccggcgagggcaaaccgcgcgacttcaagccgggc
ggcaagccgccgtggaaaaagaaggaacgcagcgaaggcggagagttccagcccgaccgt
gcgcctgctacaaacaagtccggctggtcgaaaccgaaaaaaaagcagccctga
DBGET
integrated database retrieval system
